Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00805 ATGTATTCATGTTGTGGTTCACTCAAAGATGCTCACCAAGTGTTCGATAAAATGCCTCAAAGAACTCATGTTTCTTACAATGCACTTCTTGCAGCATATTCTCGTGTATCGGAACAACATTGTGTTTATGCCTTTAACTTGTATACCCAGATGGAAAATGTGGGTCTTAGGCCTACCAACATGACTTTTACTAGCTTACTGCAAGCAGCTTCATTGCATGGAGATTTGTTGATTGGGTTGTTACTTCATGCTAAGAGTTTGAAATTTGGTTTTTTGAATGATATTTGTGTGCAAACTAGTTTGCTTAATATGTACTCAAATTGCAAGGATTTGAGTTCGGCTGAATCGGTTTTTTGTGATATGAATGAAAGGGATGATGTTGCTTGGAATTCTTTGATTGTAGGATATTTGAAGAATGATAAAATTGAGAAAGGTGTTTATCTATTTATTGAAATGATGTGGGTTGGTTTTACGCCGACTGTATACACGTTTTGTATGACTTTGAATGCATGTAGTCGTTTGAAAGATTATTTTTCTGGGAGATTGATTCATGCACGGGTAATTGTCGGGAATGTGTCGCCGGATTTACATCTGCAGAATGCACTTGTTGACATGTACTGCAATGCTGGTGATACACGAACAGCGTATATGATTTTTAGTAGGATGGAAAAATGGGATTTAGTTTCTTGGAATTCTATGATTGCTGGGTATTTTGAGAATGAGGATGGAGAGAAGGCAATGAATTTGTTTGTCCAGTTGAAGGCATTGTGCTTTCCTAAACCAGATGACTATACTTATGCTGGCATTATATCTGCAACCGGTGCTTTCCCGTGTTTCAGTTGTGGAAAACCTCTTCATGCTCAGGTTATTAAAGCAGGATTCGATAGAAGTGTGTTTGTGGGAAGCACTCTAGTATCGATGTATTTCAAAAATCAAGAAACTGAAGCTGCTCTGCGTGTATTTTGTTCAATCCCGGGAAAGGATGCTATTCTCTGGACTGAAATGATAACTGGTTATTCCAAAATGGCTGATGGAATGGGTGCAATTAGATGCTTTTCTGAAATGCATCATGAAGCTCATGAGATTGATGAATATGTTCTCAGTGGAGTTTTGAGTGTTTGTGCCGATCTTGCAATTTTAAGACAAGGTGAAATAATTCATTGTTATGCTTACAAATTGGGTTATGATGTTGAAATGTCTGTTTCTGGAAGTCTAATCGATATGTATGCCAAAAATGGTAACCTTGAAGCTGCTTATTTGGTATTTTCTCAAGTTTCCCACCCAGATTTGAAGTGTTGGAACTCAATGCTTGGAGGATTTAGTCACCATGGAATGGTGGATGACGCATTGAAACTTTTTGAGGAGATCATTAAACAAGGTCTAGTTCCAGATCAAGTGACTTTCTTGTCTCTATTGTCTGCATGCAGCCACAGTAGATTGGTTGAGCAAGGAAAGTTACTATGGAATTACATGAGCAGCATTGGTTTGGTTCCTGGGCTTAAGCACTACTCTTGCATGGTAACTTTGTTGAGTCGCGCGGCATTATTGGAAGAAGCAGAAGAAATTATATACAAATCACCTTATCTTGAGGAAAATGTTGAATTATGGAGAACTTTGCTAAGTGCTTGTGTTATAAATAACAATTTGAAAGTGGGAGTCCGTGTGGCAGAGGAAGTTTTGAGATTGAATGCAGAAGATGGTCCAACACTTGTTTTGCTTTCCAATCTTTATGCTGCTGCAGGGAGGTGGGATGAAGTTGCTGAAATAAGAAGAAATATGGAAGGATTGATAATGGAGAAAGAACCTGGGTTAAGTTGGATCGAGGCCAAGAATGACATTCATGTGTTCTGTTCTGGAGATCAATCACACCCTAAGGTTGATCAGGTGCAGGCTGAATTGCACAGGCTTAAAGGAAATATGATTAGAACAGAGAACGATGACAGTGAGGGTTGGGTGAGGTTGTATCTCCCCTTCCTTCCCGGGGAGGCCTTCTGGCTGCAGAACGTTTCTCCGGTTCATTACACTGAAGAAGCAATTAACAAGAGAATTTACTGGAAAAAGAGGGTGAAGAAAACTCGTCCCAAATTACTGCCAGACAGCAGCTACACGTGGTGGAAATACGGTCGTAAACAGCTCAAGGGCTCAATAAGATATTATTCCAAGTGTAGCATGGTGAATTGCCCAGCGAGGAAATACGAGGATCGTGCACGAGATTATCCAACGGTGGTCATCGTAACGTACAATAGGGAGCACACACACCCAAGTTTTTGA 2271 0.3985 MYSCCGSLKDAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENVGLRPTNMTFTSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSNCKDLSSAESVFCDMNERDDVAWNSLIVGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMTLNACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTRTAYMIFSRMEKWDLVSWNSMIAGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSCGKPLHAQVIKAGFDRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEAHEIDEYVLSGVLSVCADLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSIGLVPGLKHYSCMVTLLSRAALLEEAEEIIYKSPYLEENVELWRTLLSACVINNNLKVGVRVAEEVLRLNAEDGPTLVLLSNLYAAAGRWDEVAEIRRNMEGLIMEKEPGLSWIEAKNDIHVFCSGDQSHPKVDQVQAELHRLKGNMIRTENDDSEGWVRLYLPFLPGEAFWLQNVSPVHYTEEAINKRIYWKKRVKKTRPKLLPDSSYTWWKYGRKQLKGSIRYYSKCSMVNCPARKYEDRARDYPTVVIVTYNREHTHPSF 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00805 756 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 429 463 IPR002885 -
Mepo5g00805 756 Pfam PPR repeat 99 124 IPR002885 -
Mepo5g00805 756 Pfam PPR repeat 200 225 IPR002885 -
Mepo5g00805 756 Pfam PPR repeat 331 356 IPR002885 -
Mepo5g00805 756 Pfam PPR repeat 404 423 IPR002885 -
Mepo5g00805 756 Pfam PPR repeat family 125 172 IPR002885 -
Mepo5g00805 756 Pfam PPR repeat family 428 476 IPR002885 -
Mepo5g00805 756 Pfam PPR repeat family 226 272 IPR002885 -
Mepo5g00805 756 Pfam WRKY DNA -binding domain 701 754 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g00805 756 ProSiteProfiles WRKY domain profile. 693 756 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g00805 756 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 125 159 IPR002885 -
Mepo5g00805 756 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 464 498 IPR002885 -
Mepo5g00805 756 Pfam Pentatricopeptide repeat domain 24 69 IPR002885 -
Mepo5g00805 756 FunFam Pentatricopeptide repeat-containing protein At3g58590 281 381 - -
Mepo5g00805 756 Gene3D Tetratricopeptide repeat domain 482 651 IPR011990 GO:0005515
Mepo5g00805 756 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 195 229 IPR002885 -
Mepo5g00805 756 Coils Coil 626 646 - -
Mepo5g00805 756 FunFam Pentatricopeptide repeat-containing protein At3g50420 179 278 - -
Mepo5g00805 756 SUPERFAMILY WRKY DNA-binding domain 697 754 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo5g00805 756 Pfam E motif 547 608 IPR046848 -
Mepo5g00805 756 NCBIfam pentatricopeptide repeat 228 256 IPR002885 -
Mepo5g00805 756 NCBIfam pentatricopeptide repeat 127 160 IPR002885 -
Mepo5g00805 756 NCBIfam pentatricopeptide repeat 432 464 IPR002885 -
Mepo5g00805 756 NCBIfam pentatricopeptide repeat 200 227 IPR002885 -
Mepo5g00805 756 Gene3D Tetratricopeptide repeat domain 1 76 IPR011990 GO:0005515
Mepo5g00805 756 Gene3D Tetratricopeptide repeat domain 77 180 IPR011990 GO:0005515
Mepo5g00805 756 Gene3D Tetratricopeptide repeat domain 383 481 IPR011990 GO:0005515
Mepo5g00805 756 Gene3D Tetratricopeptide repeat domain 284 382 IPR011990 GO:0005515
Mepo5g00805 756 Gene3D Tetratricopeptide repeat domain 181 275 IPR011990 GO:0005515
Mepo5g00805 756 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 22 58 IPR002885 -
Mepo5g00805 756 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 121 645 IPR046960 GO:0003723|GO:0009451
Mepo5g00805 756 Gene3D WRKY domain 684 755 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo5g00805 756 FunFam Pentatricopeptide repeat-containing protein, chloroplastic 400 626 - -
Mepo5g00805 756 SMART WRKY_cls 698 755 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00805 Mepo-Chr5 7724086 7728688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00805 1 636 Glycoside Hydrolase AT3G49170 30.971 4.99e-104 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo5g00805 WRKY 1.5e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00805 - - mtr:11426309 1241.87