Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00796 ATGGATATGCCGATCATGCACGATAGCGACCGTTACGATTTCGTTCGAGATATTGGATCAGGGAATTTCGGTGTTGCTAGACTCATGAGAGATAAACACACCAAAGAACTTGTTGCTGTCAAATATATTGAACGCGGTGATAAGATTGATGAAAATGTTAAGAGAGAAATAATCAATCATAGGTCTTTGAGACATCCTAATATTGTCAGGTTTAAGGAGGTCATTTTAACACCTACTCATTTGGCCATTGTAATGGAATATGCATCTGGAGGAGAAATGTTTGACAGAATCAGCAGAGCAGGACGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAGCTGATATCCGGTGTCAGCTATTGTCATTCAATGCAAGTATGTCATCGGGATCTGAAGTTGGAAAACACTTTGTTGGATGGAGACCCAGCACTTCATTTGAAGATCTGTGATTTTGGATACTCCAAGTCTTCAGTGCTTCATTCACAACCGAAGTCAACTGTAGGAACTCCGGCTTATATTGCCCCAGAAGTGCTGCTGAAGCAAGAGTATGATGGGAAGGTTGCAGATGTATGGTCATGTGGAGTAACCTTATACGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCCGATAATCCAAAGGACTTCCGGAAGACAATTCAGAGGGTTCTCAGTGTCCAGTATTCCGTTCCAGACTTTGTTCAAATATCTCCTGAATGTCGTGAAGTTATATCAAGAATCTTTGTTTTTGACCCTACAGAGAGAATCACCATTCCAGAAATATTGAAAAATGAATGGTTTCTGAAGAATCTTCCTGCTGATTTGGTGAATGAAAAGTTAACGGATAACCAATTTGAAGAGCCAGATCAGCCCATGCAGAGCATGGATACGATCATGCAGATCATTTCAGAAGCTACCGTACCAGCAGCTGGGAGCTATTTAGACCAGTTTATGCCTGATAATGATACGGATGATGATATGGATGATATGGACTCTGACTATGAACTTGATGTAGATAGTAGTGGGGAGATTGTATATGCCATATAA 1050 0.4076 MDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKHTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEMFDRISRAGRFTEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGDPALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKVADVWSCGVTLYVMLVGSYPFEDPDNPKDFRKTIQRVLSVQYSVPDFVQISPECREVISRIFVFDPTERITIPEILKNEWFLKNLPADLVNEKLTDNQFEEPDQPMQSMDTIMQIISEATVPAAGSYLDQFMPDNDTDDDMDDMDSDYELDVDSSGEIVYAI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00796 349 FunFam Serine/threonine-protein kinase SRK2E 3 87 - -
Mepo5g00796 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Mepo5g00796 349 PANTHER SERINE/THREONINE KINASE 11 294 - -
Mepo5g00796 349 SUPERFAMILY Protein kinase-like (PK-like) 10 304 IPR011009 -
Mepo5g00796 349 ProSiteProfiles Protein kinase domain profile. 12 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00796 349 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Mepo5g00796 349 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Mepo5g00796 349 FunFam Serine/threonine-protein kinase SRK2E 88 276 - -
Mepo5g00796 349 Gene3D Transferase(Phosphotransferase) domain 1 88 275 - -
Mepo5g00796 349 Pfam Protein kinase domain 12 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00796 349 SMART serkin_6 12 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00796 Mepo-Chr5 7606641 7611109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00796 5 297 CBL-interacting serine-threonine protein kinases AT4G24400 40.391 3.93e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mepo5g00796 Pkinase 3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00796 K14498 - gmx:100783967 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01680 1 16596913 16600502 Mepo5g00796 5 7606641 7611109 PCT