Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00794 ATGGAACAACAACAATTGAACTTAGATTTGACTTTAGCCTCTGTTCCAAAAACCGTTTCTCATTTCCTCAACAACGTTGTTCAAACCAAAGACATGTCTCAGAAACTTTCAATGCTTGATGACTTAGTTCATAGCTTGGAAGAAGAAATGAAGAAAGTTCTTGCTTTCAAACGTGAACTACCACTTTCCATACTCCTCCTTAATGATGCTATAGCAAGATTGAATGATGAAAAAGAAAAGGTTGGGTTGATGAAAATGGATGATTTGAAAGAAAACTGTGATAATAAGAAGAATTGGATGAGTTCAGCTCAGCTATGGACTAATCAAACAAAATCGAAGAATGAAGGTGATGATGATGGGATTTTGTTAGAGAAGGCTAATGTTGGAGGGGTATTTATGGGATTTAATGAAAATCTGTTGAAGGAGGTTTCACAAGCTAAGAGCTTCAGTTTGGTGTCTGAAGTGAGTCATGGAAATTCTAAGAGTGGTGGTGGAAGTTCTGGATCGTCTTTGTTGCGTGTTGAGATACAGAATCAACCTCAGCCGCCGCAACCTTTGCAGCAGAGTTCCAGGAAACAAAGGAGGTGCTGGTCATCGGAGCTTCATCGCCGATTTGTTGATGCACTTCAACAGCTTGGTGGAGCACATGCAGCCACTCCTAAGCAAATTAGGGAAAAGATGCAAGTGGATGGATTAACAAATGATGAAGTGAAAAGCCATTTGCAAAAGTATAGGCTTCATGTTAGAAGATTCCCAGTTTCTTCAATCCAGGAGGCTAATAAGTTAGCCTTATATATGGCTCAAGATCAATGTGAAGATATATCGAAGGGAAACTTCTCCGAGTCTGTTTCTCCACAGGGTCCTCTTACTCCTCTTCTCCTTGGTGGATCTGTTCATGGTCTCTCAAGCCATGGAAGAAACAGTATGGATGCAGAAGATGAACAATCAGATTGCAGGAATTGGAAAAGTGATCAGGAGCAGCAACATGAAGCTGAATAA 999 0.4034 MEQQQLNLDLTLASVPKTVSHFLNNVVQTKDMSQKLSMLDDLVHSLEEEMKKVLAFKRELPLSILLLNDAIARLNDEKEKVGLMKMDDLKENCDNKKNWMSSAQLWTNQTKSKNEGDDDGILLEKANVGGVFMGFNENLLKEVSQAKSFSLVSEVSHGNSKSGGGSSGSSLLRVEIQNQPQPPQPLQQSSRKQRRCWSSELHRRFVDALQQLGGAHAATPKQIREKMQVDGLTNDEVKSHLQKYRLHVRRFPVSSIQEANKLALYMAQDQCEDISKGNFSESVSPQGPLTPLLLGGSVHGLSSHGRNSMDAEDEQSDCRNWKSDQEQQHEAE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00794 332 MobiDBLite consensus disorder prediction 277 332 - -
Mepo5g00794 332 NCBIfam myb-like DNA-binding domain, SHAQKYF class 192 247 IPR006447 GO:0003677
Mepo5g00794 332 FunFam Myb family transcription factor 191 249 - -
Mepo5g00794 332 Pfam Myb-like DNA-binding domain 194 245 IPR001005 -
Mepo5g00794 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 249 IPR017930 -
Mepo5g00794 332 Gene3D - 191 248 - -
Mepo5g00794 332 SUPERFAMILY Homeodomain-like 190 250 IPR009057 -
Mepo5g00794 332 MobiDBLite consensus disorder prediction 306 332 - -
Mepo5g00794 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 11 322 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00794 Mepo-Chr5 7574113 7576337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00794 6 242 G2-like Transcription Factor Family AT4G37180 43.985 1.18e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo5g00794 Myb_DNA-binding 7.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00794 - - pvu:PHAVU_002G021400g 314.694