LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g00787	ATGGGTCTATGCACTTCAAAAAATCTCACGCATTCCTCTCACAGTTTCAACACTGAACTTCCTCAATCAAACTCCGTCACACTTAACGGAAGTTCTGAACCTCACACAAACTCCGTTACTGCCAATGGCGAAAACTCTAACGAAACAGAAACCGTTAAGCGATCTCCGTTATTCCCGTTCTACACTCCAAGTCCAGCTCATCAATTCTTCTCAAAGATGTCTCCGGCGAGGAATTTTTTCAAGCGGCCGTTTCCTCCACCGTCTCCGGCAAAGCATATAAGATCGCTTCTAGCTCGCCGGCGTGGCTCTGTTGAAGTTTCGATACCGGAAGGTGGTGAAGAGGAGACTGTGGTTGCGCTTGATAAGAATTTTGGATTTTCCAAGCATTTTGGAAGTAGATATGAGGTTGGAGATGAAGTTGGAAGAGGACATTTTGGATTTACTTGTGCTGCGAGGTTGAAGAAAGGTGATCGTAAAGGTCAACAAGTTGCTGTTAAAGTCATTCCCAAAGCTAAGATGACATCTGCTATTGCTATTGAGGATGTGAGAAGGGAAGTGAAAATATTGAGAGCTTTGAATGGACATAAGAATCTAGTACGATTCTATGATGCTTATGAAGATCGTGATAATGTCTATATTGTAATGGAATTGTGTGAAGGTGGAGAGCTGTTGGACAGAATATTATCAAGAGGTGGGAAGTACGCGGAGGAAGATGCAAAAGCTATCCTGAGACAAATACTGAATGCTGCTGCATTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTCGCATCCAAGGACGAGAACTCAGAACTGAAAGCTATAGACTTTGGGCTGTCGGATTTTGTTAAACTAGGTATGCTTGGATCCCTTTTACGTATACTGCATGCCATTTATTATCATGGAGATGCTTTTTTTTTTTACTTCTCATTTTGCTTTACAGATGAAAGGCTCAATGATATCGTCGGTAGTGCATACTATGTGGCTCCTGAAGTTCTACTTAGATCTTATAGTACTGAGGCTGATGTCTGGAGTATTGGAGTGATTGCGTATATTTTATTATGTGGCAGCCGTCCGTTTTGGGCTCGGACTGAGTCTGGTATCTTTCGTACTGTATTGAAATCTGATCCAAGTTTTGACGATCCTCCTTGGCCTTCTCTATCAGATGAGGCAAGCGATTTTGTTAAGAGATTACTAAATAAAGACCCAAGGAAAAGAATGAGTGCAGCACAAGCATTAAGTCATCCATGGATTAAAAACTATGATGATACGAAAGTACCTTTGGATATTTTAATTTTCAAGCTCATGAAGGCATACATGCGCTCTTCTTCTCTACGAAAAGCTGCTTTAAGGGCTTTGTCTAAGGCATTGACTGTGGATGAGCAAATCTATTTGAAGGAGCAGTTTGCACTTTTAGAACCTAACAAAAATGGCACCATTAACTTGGAAAATATAAAAGCGGCCTTTACAGTAAATGCAACAGATGCAATGAAGGAGTCACGCACTGCCGACTTTCTGGCATCACTTAATGCATTGCAATATAGAAGGATGGATTTTGACGAGTTCTGTGCAGCTGCCCTTAGTGTTCATCAAATTGAAGCACTTGACCACTGGGAGAAGCGTGCACGTTATGCCTTTGACCTGTTTGAAAAGGATGGAAACAAGGCCATAGTCATTGACGAATTAGCTTCGGAGCTTGGGCTTGGTCCATCTATTCCTGTTCATGCTGTTCTTCATGATTGGATTCGGCACACTGATGGGAAGTTAAGCTTCCTTGGATTTGTGAAATTGTTGCATGGTCCATCAAGAAGTCTTGCAAAAGCTCAATAG	1851	0.4182	MGLCTSKNLTHSSHSFNTELPQSNSVTLNGSSEPHTNSVTANGENSNETETVKRSPLFPFYTPSPAHQFFSKMSPARNFFKRPFPPPSPAKHIRSLLARRRGSVEVSIPEGGEEETVVALDKNFGFSKHFGSRYEVGDEVGRGHFGFTCAARLKKGDRKGQQVAVKVIPKAKMTSAIAIEDVRREVKILRALNGHKNLVRFYDAYEDRDNVYIVMELCEGGELLDRILSRGGKYAEEDAKAILRQILNAAAFCHLQGVVHRDLKPENFLFASKDENSELKAIDFGLSDFVKLGMLGSLLRILHAIYYHGDAFFFYFSFCFTDERLNDIVGSAYYVAPEVLLRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRTVLKSDPSFDDPPWPSLSDEASDFVKRLLNKDPRKRMSAAQALSHPWIKNYDDTKVPLDILIFKLMKAYMRSSSLRKAALRALSKALTVDEQIYLKEQFALLEPNKNGTINLENIKAAFTVNATDAMKESRTADFLASLNALQYRRMDFDEFCAAALSVHQIEALDHWEKRARYAFDLFEKDGNKAIVIDELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ	616

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g00787	616	ProSitePatterns	Protein kinases ATP-binding region signature.	140	166	IPR017441	GO:0005524
	Mepo5g00787	616	PANTHER	SERINE/THREONINE-PROTEIN KINASE	121	591	-	-
	Mepo5g00787	616	SMART	serkin_6	134	425	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g00787	616	FunFam	CDPK-related kinase 1	462	534	-	-
	Mepo5g00787	616	SUPERFAMILY	EF-hand	453	607	IPR011992	-
	Mepo5g00787	616	MobiDBLite	consensus disorder prediction	1	51	-	-
	Mepo5g00787	616	FunFam	CDPK-related kinase 3	126	297	-	-
	Mepo5g00787	616	Gene3D	-	450	604	-	-
	Mepo5g00787	616	FunFam	CDPK-related kinase 1	127	222	-	-
	Mepo5g00787	616	ProSiteProfiles	Protein kinase domain profile.	134	425	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g00787	616	CDD	STKc_CAMK	133	424	-	-
	Mepo5g00787	616	ProSiteProfiles	EF-hand calcium-binding domain profile.	467	502	IPR002048	GO:0005509
	Mepo5g00787	616	FunFam	Calcium-dependent protein kinase SK5	335	430	-	-
	Mepo5g00787	616	Gene3D	Transferase(Phosphotransferase) domain 1	223	437	-	-
	Mepo5g00787	616	Gene3D	-	443	534	-	-
	Mepo5g00787	616	Pfam	Protein kinase domain	134	425	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g00787	616	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	258	270	IPR008271	GO:0004672\|GO:0006468
	Mepo5g00787	616	SUPERFAMILY	Protein kinase-like (PK-like)	131	451	IPR011009	-
	Mepo5g00787	616	Gene3D	Phosphorylase Kinase; domain 1	127	222	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g00787	Mepo-Chr5	7458638	7463318	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g00787	1	616	EF-hand Containing Proteins	AT3G50530	71.586	0.0	902

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CDPK	Mepo5g00787		Pkinase	4e-67	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g00787	K00924		-	gmx:100794177	899.427