Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00765 ATGTCGCAGCGGTCGGCGCCAGCGCCGTTTTTGTTGAAGACTTATCAGATGGTGGATGATTTTGCGACGGATGATGTGATATCATGGAGTGAGAGTGGTGAAAGTTTTGTTGTGTGGAAACATGCTGATTTTGCAAGGGATTTGCTTCCTAAATATTTCAAGCACAACAATTTCTCTAGCTTTGTTCGTCAGCTCAATACTTATGGATTCCGAAAGCTCGTGCCGGATAAATGGGAATTTGCAAACGAGAATTTCAAACGTGGCCACAAACACCTCCTCACCGATATCAAACGCCGCAAAACCATCCCACAATCATCGTCGCAACCCGTGGAAGCTGAAAAAACCAGCGTCAATGTCAACTCTCCTTCAAACTCCGGTAACGACGGAGTAGGATCAACCTCAACCTCTTCCTCCAATTCAAAAAACCCTGGATCAGTGGAAACAACAACAACATTTCCTCAATGTATCAACTTATCGAGCGAAAATGAGAAATTAAAAAAAGACAATGAAACGTTGAGTCATGAATTGACACGTGCAAAGAAACAATGCGAAGAGTTGGTGACTTTTTTAAAAGACAATTTAAATGTGGGTCCAGATCAAATCGATCGCATAATGAAGCAACAAGGAAGTTGTGAATCTGTTCAAAATGCGGTTGGTGAAAATGAAGAAAGTGGAAGAGATTGTTTGAAATTGTTTGGTGTTTGGTTGAAAGAAGAAAATTACACAAAAGAAAGAAACAATAAGAAGAGAGGTTGTGAAGACCAATTGAGCTTTGGTGGGCCTCGAGCTAAAGTGGGAAACAATGTTGTTGACTTTAGTGCTGTTAATGTTGTGAACATGATGAAAAGTGGCAAGGTTTGTAACTGA 867 0.4072 MSQRSAPAPFLLKTYQMVDDFATDDVISWSESGESFVVWKHADFARDLLPKYFKHNNFSSFVRQLNTYGFRKLVPDKWEFANENFKRGHKHLLTDIKRRKTIPQSSSQPVEAEKTSVNVNSPSNSGNDGVGSTSTSSSNSKNPGSVETTTTFPQCINLSSENEKLKKDNETLSHELTRAKKQCEELVTFLKDNLNVGPDQIDRIMKQQGSCESVQNAVGENEESGRDCLKLFGVWLKEENYTKERNNKKRGCEDQLSFGGPRAKVGNNVVDFSAVNVVNMMKSGKVCN 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00765 288 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00765 288 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 208 IPR027725 -
Mepo5g00765 288 Gene3D - 2 101 IPR036388 -
Mepo5g00765 288 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00765 288 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00765 288 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00765 288 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00765 288 FunFam Heat stress transcription factor B-4 2 100 - -
Mepo5g00765 288 Gene3D - 149 193 - -
Mepo5g00765 288 MobiDBLite consensus disorder prediction 97 153 - -
Mepo5g00765 288 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00765 288 SUPERFAMILY "Winged helix" DNA-binding domain 6 99 IPR036390 -
Mepo5g00765 288 Coils Coil 155 182 - -
Mepo5g00765 288 MobiDBLite consensus disorder prediction 99 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00765 Mepo-Chr5 7243747 7246676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00765 2 288 HSF AT4G36990 50.164 5.15e-84 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo5g00765 HSF_DNA-bind 2.7e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00765 K09419 - gmx:100791543 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00765 5 7243747 7246676 Mepo5g00765 5 7243747 7246676 ECH
Mepo5g00765 5 7243747 7246676 Mepo1g01899 1 19087501 19092279 PCT