Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00755 ATGGATGAAGACATACTGAAAACTTTGGGAAATGTTGAAAGCAACATGGACATGATGACAATGATGATGCAAATGGAAAAGTTCCCTGATTCATATGAACCTTTTTATAGCAACACCAATAACAACACTCTCAATCTCAATCTCACCAACAATGATTTCCTTTATGGAAACTCAAATGTAACTTCATCACTCACGCCTTCATTGATCAATCCACCATTGTCATATCCTCTTCAACAACCAATGACACCGCCGTCGCTTCAACCCAACCGAGTTCAAACCCCATCAGGAAAAACCAACAATTCTTCGTTCTCCTATCCGGAGAAGAAGAATTCAATGTCAGCAATGAGAGAGATGATATTCCGTATGGCGGTTATGCAACCGATTAACATAGACCCAGAAACCATTAAACCACCAAAGAGAAAGAATGTGAAGATTTCAAAGGATCCACAAAGTGTAGCAGCAAGACATAGAAGAGAAAGAATTAGTGAAAGAATAAGGATATTACAAAGATTGGTACCTGGTGGAACAAAAATGGACACTGCTTCAATGTTAGATGAAGCAATACATTATGTAAAGTTTTTGAAGAAACAAGTTCAAACGTTGGAACAAGTTGGGGCAAATAGACCTTTGAATGTTGTTGGGTTTCCAGGAGTGGTTTCTAATGCTAATTTTAATTATTCTTCTTTGCTTAGAGGTTGTTCATCACCTTGTCAAATGGTGGGTCCCACTTCCAAACAAATGCTTAGTTGA 750 0.38 MDEDILKTLGNVESNMDMMTMMMQMEKFPDSYEPFYSNTNNNTLNLNLTNNDFLYGNSNVTSSLTPSLINPPLSYPLQQPMTPPSLQPNRVQTPSGKTNNSSFSYPEKKNSMSAMREMIFRMAVMQPINIDPETIKPPKRKNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGANRPLNVVGFPGVVSNANFNYSSLLRGCSSPCQMVGPTSKQMLS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00755 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 204 IPR036638 GO:0046983
Mepo5g00755 249 CDD bHLH_AtIND_like 146 202 - -
Mepo5g00755 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
Mepo5g00755 249 MobiDBLite consensus disorder prediction 84 107 - -
Mepo5g00755 249 SMART finulus 151 200 IPR011598 GO:0046983
Mepo5g00755 249 MobiDBLite consensus disorder prediction 73 107 - -
Mepo5g00755 249 MobiDBLite consensus disorder prediction 134 157 - -
Mepo5g00755 249 FunFam BHLH transcription factor 148 211 - -
Mepo5g00755 249 Gene3D - 144 210 IPR036638 GO:0046983
Mepo5g00755 249 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 35 228 IPR045843 GO:0003700|GO:0006355
Mepo5g00755 249 MobiDBLite consensus disorder prediction 131 157 - -
Mepo5g00755 249 Pfam Helix-loop-helix DNA-binding domain 155 194 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00755 Mepo-Chr5 7113194 7114474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00755 14 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 54.587 3.47e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo5g00755 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00755 - - gmx:100796649 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00755 5 7113194 7114474 Mepo5g00755 5 7113194 7114474 ECH