Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00730 ATGAATTGGGTTCGAGGTAAGATGCTAGGTAGTGGCGGCTTTGCCACTGTCAACTTAGCCACACATAAGGATTCCGATATCTTTCCGCCTCTCACCGCCGTCAAATCCTCAGATACGTACAATTCCAGTTTTCTCCTAAGCGAGAAAAAAATACTCGACAGTTTATCATCGCCGTATATTATTAGATGTTTTGGCCGAGATCAAACTTATGAAAACGGTGAAGAATCCTATAATATTTTTCTTGAATATGCTCAAGGTGGTACTCTATCTGATCAACTCAAGAAGCACGGTGGGAAGTTCCCGGAAACTCTCGTTCGTCGTTACACAAAGTCCGTCGTTGAAGGACTCAAACATATTCACGACAAAGGCTTTGTTCACTGTGATTTGAAGCTGCCAAATATCCTTGTATTTGATGAGGGCGAAGTTAAGATTTCAGATTTTGGCCTTGCTAAGGAGAAAGGTTTCAAGAGTGAAAAATGGGAATGTAGGGGAACTCCGATGTATATGTCACCGGAAGCAGTGAATGAGAGTGTTTATGAATCGCCAGCTGATATATGGGCTCTTGGATGTGCCGTTTTAGAGATGGTTACTGGAAAATCTCCATGGAATGTAAGCTGCAAGACAAATATGTGGTGGTTTTTGACTCATATTGGAATGGGAGAAGAAATACCGTTGATTCCAAATGAATTATCAGAAGAAGGGAAAGATTTTCTTGAAAAGTGTTTTGTTAGAGATCATTTGAAGAGATGGAGTGCAGATATGCTATTAAAACACCCTTTCATTTTTGACTGTGATGATGAAAATGTTTCGTTGATGAAAGAGTTAAATATTAAAGAGTCGTCATTGCCATTCCCATCTCCACGGACACACTTTGATTTTTTGCATTGGTCTTCTTCAACCTCAACGACTCTGCCTCCTAATTTAGAGTTGTGTGAGTCTGAATTTCAGCATGGTTTTCCTTCACTGGCAGAGAGGCTTCAGCAACTAGTTGTAGATCATAAACCGTCAGATTTCTTAGAATCGGATGGTTGGTGTGTTGTTAGGTCAAATTAG 1053 0.4027 MNWVRGKMLGSGGFATVNLATHKDSDIFPPLTAVKSSDTYNSSFLLSEKKILDSLSSPYIIRCFGRDQTYENGEESYNIFLEYAQGGTLSDQLKKHGGKFPETLVRRYTKSVVEGLKHIHDKGFVHCDLKLPNILVFDEGEVKISDFGLAKEKGFKSEKWECRGTPMYMSPEAVNESVYESPADIWALGCAVLEMVTGKSPWNVSCKTNMWWFLTHIGMGEEIPLIPNELSEEGKDFLEKCFVRDHLKRWSADMLLKHPFIFDCDDENVSLMKELNIKESSLPFPSPRTHFDFLHWSSSTSTTLPPNLELCESEFQHGFPSLAERLQQLVVDHKPSDFLESDGWCVVRSN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00730 350 SUPERFAMILY Protein kinase-like (PK-like) 2 307 IPR011009 -
Mepo5g00730 350 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00730 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mepo5g00730 350 Gene3D Transferase(Phosphotransferase) domain 1 2 289 - -
Mepo5g00730 350 SMART serkin_6 3 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00730 350 ProSiteProfiles Protein kinase domain profile. 3 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00730 350 CDD STKc_MAPKKK 2 261 - -
Mepo5g00730 350 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 302 - -
Mepo5g00730 350 ProSitePatterns Protein kinases ATP-binding region signature. 9 35 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00730 Mepo-Chr5 7008520 7009572 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00730 1 348 MAP Kinase Kinase Kinase AT5G67080 47.354 9.10e-107 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mepo5g00730 Pkinase 1.5e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00730 - - gmx:100797177 410.609