Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00726 ATGAATTGGGTTCGGGGTAAGATGTTAGGTAATGGCACCTTCGCCACCGTCAACTTAGCCACACACCCACAGAATTCCCGTACCTTTCCGTCTCTCACCGCCGTCAAAACCTCTGATACTTACGGCTCCCATTTTCTCGTAAACGAGAAACAAATACTTGATAGTTTAGGATCATCCACACATATTATTAAGTGTTTTGGTGAGGATCAAACTTTCGAAAACGGTGAAGAGTGTTATAATATTTTTCTAGAATATGCTGCTGGTGGTACTCTCTCCGATCAACTCAAGAATCATGGTGGTAAGTTACCGGAGAATCTCATTCAGCGTTACACGAGGTCTGTCGTTCAAGGACTCAAACATGTTCATGAAAACGGTTTTGTTCACTGCGATTTGAAGCTACAGAACATTCTTGTATTTGAGGATGGCGAAGTTAAGATTTCGGATTTTGGCCTTGCTAAAGAGAAAGGTTTAAAACATGGTGGAAAATTGGAATGCAGGGGTACTCCGTTGTATATGTCGCCAGAAGCAGTGAATGAGAGTGTTTATGAATCGCCCGCAGATATATGGGCTCTTGGTTGCGCTGTTGTGGAGATGGCTACGGGTAAACCTGCATGGAATGTAAGTAGCGGTTCAAATATGTGGTCATTGTTGATTCGAATTGGGGCAGAAGACGAATCACCTTTGATTCCAGATGAATTATCGCAAGTCGGAAAAGATTTTCTCGAAAAGTGTTTCATTAAGGATCCTTTGAAAAGATGGACTGCGGGGATGCTTTTGAAACATGAGTTTATCTCAAGTGATGAAACTGTTTCATTGGTGAAAGAGTTGATCAATGAGTCACCATTGTCAATATCACCGTCTCCGAGAACTCACTTCGATTTTCCTCATTGGGCTTCTTCTAGTGTTACGACTTTGTCTCCTGATACAAAGGAATTATGTGAATTGAAATTTGAGCAAGGTTTTTGTTCACCGGACGAGAGGCTTCAACGACTAGTCACAGATCAAAGACCGTTAGATTGGTCAGAATCCGATGCTTGGTGTTTTGTTCGGTCAAATTAA 1059 0.4183 MNWVRGKMLGNGTFATVNLATHPQNSRTFPSLTAVKTSDTYGSHFLVNEKQILDSLGSSTHIIKCFGEDQTFENGEECYNIFLEYAAGGTLSDQLKNHGGKLPENLIQRYTRSVVQGLKHVHENGFVHCDLKLQNILVFEDGEVKISDFGLAKEKGLKHGGKLECRGTPLYMSPEAVNESVYESPADIWALGCAVVEMATGKPAWNVSSGSNMWSLLIRIGAEDESPLIPDELSQVGKDFLEKCFIKDPLKRWTAGMLLKHEFISSDETVSLVKELINESPLSISPSPRTHFDFPHWASSSVTTLSPDTKELCELKFEQGFCSPDERLQRLVTDQRPLDWSESDAWCFVRSN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00726 352 ProSiteProfiles Protein kinase domain profile. 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00726 352 SMART serkin_6 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00726 352 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Mepo5g00726 352 Pfam Protein kinase domain 5 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00726 352 SUPERFAMILY Protein kinase-like (PK-like) 2 307 IPR011009 -
Mepo5g00726 352 CDD STKc_MAPKKK 2 264 - -
Mepo5g00726 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Mepo5g00726 352 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 300 - -
Mepo5g00726 352 Gene3D Transferase(Phosphotransferase) domain 1 2 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00726 Mepo-Chr5 6988222 6989280 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00726 1 350 MAP Kinase Kinase Kinase AT5G67080 52.355 4.58e-125 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mepo5g00726 Pkinase 4.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00726 - - aprc:113869133 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00726 5 6988222 6989280 Mepo5g00726 5 6988222 6989280 ECH
Mepo5g00726 5 6988222 6989280 Mepo1g01892 1 18989276 18990605 PCT