Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00723 ATGGCGGACGACGACGGTTCAAGCAGGAAACGAAGACCAACCCGAGGCCCTGACGCCACCGCACGCAGCCAAGCCTTAGAACTTCTCCGATCCCGCAGATCCAACGGTCCCCGATCCACCACCACACCACAAATCCGACTCGAAAATCCTATCTACGACACAATCCCCGAGGAAGAATACACCGCCTTAGTCGCCAGCCGCCGTGAACAATCCCGCTCATTCATCGTCGATGACGATGGATTCGGTTACAACGATGAAGGCGAAGAAGAGGATTGGTCCAAAGCCGGTTTCTCCCTTTCCTCAGACGAAGAATTCGATGAATCTGAGAAACCTAAACGGAAGAAAGAGAGAGACGCTTCGCAGATCAAGCGTCCTTCTGTTTCTTCTTCTGCGGCAAAATTATCAGCTGCTGCTGCTATGATGGGTGGATCGAGAGTTTCTTCGATGTTTACTTCTGCTAATTTTAAGAAAAGTAGAGATGATAAGGTGTGTGAGAGTATTGTTGATGATGTTCTTAAGGAGTTTGCGCCGGATGAGAACGATAAAATTAGTCGGAGAAAGGTTCAATCGAACTCGTTTTCTGTTGTTAATGATGCACAGATTAAGGCTAAACCTAAGCCCTCTGCTGAATCTGTATTAGGCTCTTATGCGAGTGAAAATTTTGCGAAAATTGGTAATGGTGGAAATGGTGAAATTGAATCTGTTAGGGTTAATAAGGACAAGGATAATGGATCTAGGTTAGGGTTAGAGGAAAAGAGTGAAGTAGAAGTGAATGAGAGTTTGGGAAATTGCGAGGGAGGAATAGTGGTCGAAGATAATGAACGTGGTAATGGGGATTTAGTTGAAGAGAAAGTGGCGGAGGTGAAAGATGAAGAAATGGAAGTGAAACCTGTGGTGAAGAAGGAGGGTTTTACTTTGAATGCGAAAGTTAGTGAAGAAGTGGTGGATCAGAAGTTGTGTGCTACTGCTGGATGGCAGGCGGCGAGGAGTGGTGGTGGTGGAGGCGGGGAGGTAAACATCGCTGATTTGAATAATCAACAACAGGTGGAGTTTAATTTGGAGCCGGAGGGATCGTTGCCTTTTTACATACTTGATGCTTATGAGGAGTATTATGGAGCTAATATGGGTACTCTTTATTTGTTTGGGAAGGTCAAAACAGGGACTTTGTATCAGAGTTGCTGTGTTGTTGTGAAGAACATGCAGAGGTGTGTCTATGCAATTCCAAGTCATCCTTTGCATTCAACCGGTGAGATGATACAGCTTGAGAAAGATGTCCAAGAGTCTCGAATTTCTCCTGCAGATTTCCGTAAAAAGCTGCAAGACGCAGTATCTGATACAAAGAATGAGATAGCAAAACATCTGGTGGATTTGGGTGTTTCTTCCTTTAGCATGGCACCTGTTAAGAGGAAATATGCTTTTGAACGAACAGACATTCCTGCAGGTGAAAATTATGTGGTGAAAATAAATTATCCGTTCAAGGATACGGCACTTCCAGTAGACCTCAAAGGAGAAAGTTTCTGTGCTCTTCTTGGAGCTCGAAACAGTGCACTTGAGTTATTTCTGATTAAAAGAAAGATTAAGGGGCCTTCATGGTTACAAGTTTCAAACTTTTCTACCTGCTCAGCATCCCAAAGGGTTAGCTGGTGCAAATTTGAAGTGGCTGTCGACTCTCCTAAAGACATCAGGAATTCTTCAAAAATCACTCCAGTGACTCCCCCTGTGGTTGTCACAGCAATAAACTTGAAGACCACCATAAATGAAAAACAGAACATAAATGAAATTGTATCTGCATCTGTTGTCAGTTGCAATATGGTTAAGATTGACACTCCTATGCTGTCTTCAGAGTGGAAGAGACCTGGAATGCTGACCCATTTTACTGTTATTCGCAAACTTGATGGGAATATATTTCCAATGGGATTCAATACGGAGGTTACGGACAGAAACATAAAAGCTGGGTCAAATGTTCTGTGTGTTGAAAGCAGTGAAAGAGCTTTGTTAAATCGTCTAATGTTACAATTACACAAGATGGATAGCGACGTTCTTGTTGGACATAATATTTCTGGATTCGACCTCGATGTTCTTCTACACAGATCTCAGGCTTGTAGAGTACCAAGCAGCATGTGGTCTAAACTGGGCCGTCTCAACCGTTCTACGATGCCTAAGCTCGATAGAAGAGGCAAAACATTTGGTTTTGGAGCTGATCCTGCTATTATGTCTTGTGTTGCCGGTCGGCTTCTTTGTGATACGTATTTATGTTCTCGTGACCTATTAAAGGAGGTTAGCTATTCTTTAACTCACCTTGCAAAAACACAGCTAAACCAGTCTCGGAAGGAAGTTGCTCCACATCAAGTTCCAAAAATGTTCCAAACTGCAAAATCCCTGATGGAGCTGATTGAATATGGGGAAACGGATGCATGGTTGTCTATGGAACTCATGTTTTATTTGAGTGTCCTTCCTCTCACACGCCAGTTGACTAATATAAGTGGCAACCTATGGGGGAAAACTCTTCAGGGTGCCCGGGCACAGAGGGTGGAGTATCTTTTGTTGCATGAATTCCATACAAAGAAATATATTGTTCCAGACAAGTTTTCTAATTACGCAAAAGAAACAAAATTGACAAAGCGCAGAGTAACTCATGGTGTCGATGATGGCAACTTTGACGATGCAGATATTAATGATGGAAACTATCATAATGATGCTTCTGAAAGTGATCATAAGAAAAACAAAAAGGCTGCTTCCTATGCTGGAGGACTGGTTTTAGAGCCAAAGAAGGGTCTATATGATAAATACATATTACTTCTGGACTTCAACAGTCTATACCCTTCCATCATTCAGGAATATAATATCTGCTTCACAACTGTTGAAAGATCTTCAGATGGATCTTTTCCTCGTCTGCCATCTAGTAAAACAACTGGAGTCTTGCCAGAGTTGCTGAAAAAGCTGGTTAAGTGGAGGCGAGACAAAAAGGCATCGATGAAAACTGCATCTGGTCTTAAACGTCAGCAACTGGACATTCAGCAGCAAGCACTGAAGCTTACTGCCAACAGTATGTATGGATGCCTAGGATTTTCCAATTCAAGATTTTATGCAAAACCACTGGCTGAGCTCATTACCCTACAAGGAAGGGAGATACTACAAAGTACTGTTGATCTTGTTCAAAATAACTTGAATTTAGAGGTGATCTATGGTGATACTGATTCAATAATGGTTTACAGTGGGCTAGATGATATTGCAAAAGCAACTTCAATATCTAAGAAAGTTATTCAAGAGGTCAATAAGAAATATCGGTGCTTAGAAATTGATCTTGATGGTTTGTATAAGAGGATGCTACTTCTCAAGAAAAAGAAATATGCAGCTGTTAAGGTGCAGTTTAAAGATGGCACCCCATATGAGGTTATTGAACGCAAAGGTCTTGATATTGTCCGCCGTGACTGGAGCTTGTTAGCAAAAGATTTAGGAGATTTTTGCTTGACTCAAATTTTGTCGGGAGGGTCATGCGAAGATGTTGTCGAATCAATTCACAACTCTCTCATGAAGGTACAAGAAGAAATGAGGAACGGACAAGTAGCATTGGAAAAATACGTCATCACAAAGACATTGTCTAAACCACCCGAAGCATATCCTGATGCCAAAAACCAGCCACATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACACATCTGGTTGCTCTGTTGGCGATACAATCCCTTACGTAATTTGCTGTGAGCAGGGTGGTAGTTCAGGCAGTGCGACCGGAATTGCTCTACGTGCCAGACATCCAGATGAATTGAAACGAGAACAGGGGACATGGCTAATTGATATTGAATACTATTTGTCACAACAGATTCATCCTGTGGTATCACGTCTTTGTGCATCAATTCAGGGCACAAGCCCTGAAAGACTAGCTGATTGTTTAGGGCTTGACACATCAAAGTTTCAACATAAATCAAGTGAAGCAAGTGATGATCCTACAAGCTCACTTTTATTTGCTGGTGATGATGAGGAGAGGTATCGGGGATGTGAGCCGTTGGTCTTGTCATGCCCCAGCTGCTCTAGTGTATTTGACTGCCCTCCTGTGTTTAAATCTATTTGTATGTTGGGAAATGAAAAGCCAACCAGCTCAGGCGCGGAGGAATCTGACTACAATTTCTGGCGCAAGCTGTGCTGTCCCAAATGCTTTGAAAATGGTGTTGGTAGAATTTCTCCTGCAATGATAGCCAATCAGGTCAAACGGCAAGCAGAGAAGTTTGTTTTAATGTATTATAGAGGTTTACTAATTTGCGACGATGAAACGTGTAAGCATACAACTCGAAGTGTCAGCTTTCGTTTGGTTGGTGATTCTGAGCGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAACGGGCATCTTAATAGAAAGTACACTGAAGCGGACTTGTACAAGCAGCTCTCATATTTTTGTCATGTGTTTGATACTGTTTGTTATATAGAAAAGATGGAGGCAAAGTCTAGGATACCGATAGAGAAGGAGTTGATCAAAATCAGGCCAATAGTTGATCTTGCTGCATCAACAATACAAAGGATCAGGGACCGCTGTGCCTTTGGGTGGGTGAAGCTGCAGGATCTAGTTGTTGCAATTTAA 4626 0.4233 MADDDGSSRKRRPTRGPDATARSQALELLRSRRSNGPRSTTTPQIRLENPIYDTIPEEEYTALVASRREQSRSFIVDDDGFGYNDEGEEEDWSKAGFSLSSDEEFDESEKPKRKKERDASQIKRPSVSSSAAKLSAAAAMMGGSRVSSMFTSANFKKSRDDKVCESIVDDVLKEFAPDENDKISRRKVQSNSFSVVNDAQIKAKPKPSAESVLGSYASENFAKIGNGGNGEIESVRVNKDKDNGSRLGLEEKSEVEVNESLGNCEGGIVVEDNERGNGDLVEEKVAEVKDEEMEVKPVVKKEGFTLNAKVSEEVVDQKLCATAGWQAARSGGGGGGEVNIADLNNQQQVEFNLEPEGSLPFYILDAYEEYYGANMGTLYLFGKVKTGTLYQSCCVVVKNMQRCVYAIPSHPLHSTGEMIQLEKDVQESRISPADFRKKLQDAVSDTKNEIAKHLVDLGVSSFSMAPVKRKYAFERTDIPAGENYVVKINYPFKDTALPVDLKGESFCALLGARNSALELFLIKRKIKGPSWLQVSNFSTCSASQRVSWCKFEVAVDSPKDIRNSSKITPVTPPVVVTAINLKTTINEKQNINEIVSASVVSCNMVKIDTPMLSSEWKRPGMLTHFTVIRKLDGNIFPMGFNTEVTDRNIKAGSNVLCVESSERALLNRLMLQLHKMDSDVLVGHNISGFDLDVLLHRSQACRVPSSMWSKLGRLNRSTMPKLDRRGKTFGFGADPAIMSCVAGRLLCDTYLCSRDLLKEVSYSLTHLAKTQLNQSRKEVAPHQVPKMFQTAKSLMELIEYGETDAWLSMELMFYLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHEFHTKKYIVPDKFSNYAKETKLTKRRVTHGVDDGNFDDADINDGNYHNDASESDHKKNKKAASYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSSKTTGVLPELLKKLVKWRRDKKASMKTASGLKRQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMVYSGLDDIAKATSISKKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGTPYEVIERKGLDIVRRDWSLLAKDLGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYVITKTLSKPPEAYPDAKNQPHVLVAQRLKQQGYTSGCSVGDTIPYVICCEQGGSSGSATGIALRARHPDELKREQGTWLIDIEYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDTSKFQHKSSEASDDPTSSLLFAGDDEERYRGCEPLVLSCPSCSSVFDCPPVFKSICMLGNEKPTSSGAEESDYNFWRKLCCPKCFENGVGRISPAMIANQVKRQAEKFVLMYYRGLLICDDETCKHTTRSVSFRLVGDSERGTVCPNYPRCNGHLNRKYTEADLYKQLSYFCHVFDTVCYIEKMEAKSRIPIEKELIKIRPIVDLAASTIQRIRDRCAFGWVKLQDLVVAI 1541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00723 1541 MobiDBLite consensus disorder prediction 74 135 - -
Mepo5g00723 1541 FunFam DNA polymerase 972 1021 - -
Mepo5g00723 1541 Pfam DNA polymerase alpha subunit p180 N terminal 26 92 IPR024647 -
Mepo5g00723 1541 Gene3D - 401 527 - -
Mepo5g00723 1541 SUPERFAMILY DNA/RNA polymerases 856 1309 IPR043502 -
Mepo5g00723 1541 FunFam DNA polymerase 401 527 - -
Mepo5g00723 1541 Gene3D - 572 884 IPR036397 GO:0003676
Mepo5g00723 1541 CDD POLBc_alpha 907 1310 IPR045846 GO:0003887|GO:1902975
Mepo5g00723 1541 Pfam DNA polymerase family B, exonuclease domain 391 765 IPR006133 -
Mepo5g00723 1541 Gene3D Helix hairpin bin 970 1021 - -
Mepo5g00723 1541 SMART polmehr3 572 1074 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mepo5g00723 1541 MobiDBLite consensus disorder prediction 1 52 - -
Mepo5g00723 1541 MobiDBLite consensus disorder prediction 1 17 - -
Mepo5g00723 1541 ProSitePatterns DNA polymerase family B signature. 1062 1070 IPR017964 GO:0000166|GO:0003676
Mepo5g00723 1541 MobiDBLite consensus disorder prediction 87 122 - -
Mepo5g00723 1541 Pfam DNA polymerase family B 831 1294 IPR006134 GO:0000166|GO:0003677
Mepo5g00723 1541 SUPERFAMILY Ribonuclease H-like 356 860 IPR012337 -
Mepo5g00723 1541 FunFam DNA polymerase 1138 1324 - -
Mepo5g00723 1541 NCBIfam DNA polymerase (pol2) 51 1292 - -
Mepo5g00723 1541 CDD DNA_polB_alpha_exo 578 823 - -
Mepo5g00723 1541 Gene3D Palm domain of DNA polymerase 900 1125 IPR023211 -
Mepo5g00723 1541 MobiDBLite consensus disorder prediction 27 48 - -
Mepo5g00723 1541 FunFam DNA polymerase 1332 1527 - -
Mepo5g00723 1541 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 18 1539 - -
Mepo5g00723 1541 Gene3D - 1138 1325 IPR042087 -
Mepo5g00723 1541 Pfam DNA Polymerase alpha zinc finger 1334 1537 IPR015088 GO:0003887|GO:0006260
Mepo5g00723 1541 PRINTS DNA-directed DNA-polymerase family B signature 931 944 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mepo5g00723 1541 PRINTS DNA-directed DNA-polymerase family B signature 1007 1019 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mepo5g00723 1541 PRINTS DNA-directed DNA-polymerase family B signature 1060 1068 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mepo5g00723 1541 FunFam DNA polymerase 572 886 - -
Mepo5g00723 1541 Gene3D DNA Polymerase alpha, zinc finger 1333 1525 IPR038256 -
Mepo5g00723 1541 Coils Coil 1088 1108 - -
Mepo5g00723 1541 Gene3D - 361 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00723 Mepo-Chr5 6954856 6967419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00723 1 1539 Core DNA Replication Machinery Family AT5G67100 60.476 0.0 1831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00723 K02320 - gmx:100798779 2201.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00723 5 6954856 6967419 Mepo5g00723 5 6954856 6967419 ECH