Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00708 ATGTGGGATCTGAATGACTCACCTGATCAGAGAAAAAACTATGAATCAGAAGGGTGTTCAATGGAAGGTGATGAAAAAGGAAAAGGTGTTGGATCTGTTTCAAATTCAAGTTCATCAGCAATAGTTATAGAAGATGGATCGGAAGAAGAAGATGGTAACATGATGAAGAAAAAGAGTAGTAAGATATTTGGATTTTCAATGGATGATAGTAGTGAGTGTCCACCTGTGACTAGACAGTTTTTTCCTGTGGAGGATTCTGATATGATAACAACGGTGGTGGATTCTTCTTCCGGTGGTGGTGGTGGAAGCTCTTCTTTTCCAAGAGCTCATTGGGTAGGTGTAAAATTTTGTCAATCAGAATCTGTTAACGGTGGTAAAATAGTTGAAGCTTCACAACCGATGAAGAAGAGTCGTAGAGGACCAAGGTCCAGAAGTTCTCAGTATAGAGGTGTTACTTTTTACAGAAGAACAGGTCGATGGGAGTCTCATATATGGGATTGTGGAAAACAAGTGTATTTGGGTGGATTTGACACGGCACATGCAGCTGCTCGTGCATATGATAGAGCTGCAATTAAATTCAGAGGAGTAGAGGCAGATATAAATTTCAACATTGAAGATTATGAAGAGGATTTGAAGCAGATGAGCAATTTAACTAAGGAAGAATTTGTGCATGTACTACGGAGACAAAGCACTGGATTTCCAAGAGGAAGTTCTAAATATAGAGGTGTGACTTTGCATAAATGTGGAAGATGGGAGGCTAGAATGGGTCAATTCTTAGGAAAAAATTTGATTCAATTTACCAGGTATGTTTATCTGGGTTTGTTTGACACTGAGATTGAAGCTGCAAGGGCATATGATAAAGCAGCAATTAAATGCAATGGCAAAGAGGCTGTCACCAATTTTGATCCCAGCATCTATGATAATGAACTTAATTCTGAATCATCAGGTAATGCTACAGATCACAATTTGGATTTGAGTTTGGGAAATTCAAGTTCTAAATGTAGCAATAATCAAGCATTTGGGAATCACAACACAAATTCCACCACTGATCAATACATGGCACCTGAATTAAATTGGCGAAATGGTGGAATCAGACCTAAGCCTGTGAATATACTACCTAAACCATGTGGTATAAGTAACATGGATGGCTTTGTAAGGGATGGATATGGAGAGAATGAAGCCTTGAGGATGCTAAGCCAAACTCACCTTCATCAATCTTCAGTTGCCACTAATGAAATGCATAGATTTGGTCCCTATAGGTCACCTATGATTGAACAACACCCTCAAATGCTTCACAATTTTCCACATCTTCACCCCTCAAATTTTCATGTTTCGAGCAGCAGCAGCAATGGAGGCCGAATCGGAAGTGATTTAACATTATCAATGTCTGATCAACAAAAATGGCAAACAGGGCCTCCTCCACATTTGTTAGCAACTGCTGCAGCATCATCAGGATTCCCACCTCAAATAAGACCCTCTTCTTCTCAAGGTTGGCTGCAGAAAAATGGGTTCCACACTCTCATGAGACCCTCTTGA 1536 0.3984 MWDLNDSPDQRKNYESEGCSMEGDEKGKGVGSVSNSSSSAIVIEDGSEEEDGNMMKKKSSKIFGFSMDDSSECPPVTRQFFPVEDSDMITTVVDSSSGGGGGSSSFPRAHWVGVKFCQSESVNGGKIVEASQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKNLIQFTRYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNSESSGNATDHNLDLSLGNSSSKCSNNQAFGNHNTNSTTDQYMAPELNWRNGGIRPKPVNILPKPCGISNMDGFVRDGYGENEALRMLSQTHLHQSSVATNEMHRFGPYRSPMIEQHPQMLHNFPHLHPSNFHVSSSSSNGGRIGSDLTLSMSDQQKWQTGPPPHLLATAAASSGFPPQIRPSSSQGWLQKNGFHTLMRPS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00708 511 FunFam AP2-like ethylene-responsive transcription factor 146 205 - -
Mepo5g00708 511 Gene3D AP2/ERF domain 238 303 IPR036955 GO:0003700|GO:0006355
Mepo5g00708 511 Gene3D AP2/ERF domain 146 205 IPR036955 GO:0003700|GO:0006355
Mepo5g00708 511 SMART rav1_2 147 209 IPR001471 GO:0003700|GO:0006355
Mepo5g00708 511 SMART rav1_2 239 308 IPR001471 GO:0003700|GO:0006355
Mepo5g00708 511 SUPERFAMILY DNA-binding domain 146 204 IPR016177 GO:0003677
Mepo5g00708 511 ProSiteProfiles AP2/ERF domain profile. 239 302 IPR001471 GO:0003700|GO:0006355
Mepo5g00708 511 MobiDBLite consensus disorder prediction 1 24 - -
Mepo5g00708 511 MobiDBLite consensus disorder prediction 1 56 - -
Mepo5g00708 511 SUPERFAMILY DNA-binding domain 238 304 IPR016177 GO:0003677
Mepo5g00708 511 CDD AP2 147 204 IPR001471 GO:0003700|GO:0006355
Mepo5g00708 511 ProSiteProfiles AP2/ERF domain profile. 147 203 IPR001471 GO:0003700|GO:0006355
Mepo5g00708 511 MobiDBLite consensus disorder prediction 128 147 - -
Mepo5g00708 511 CDD AP2 238 304 IPR001471 GO:0003700|GO:0006355
Mepo5g00708 511 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 74 402 - -
Mepo5g00708 511 PRINTS Ethylene responsive element binding protein signature 240 251 IPR001471 GO:0003700|GO:0006355
Mepo5g00708 511 PRINTS Ethylene responsive element binding protein signature 284 304 IPR001471 GO:0003700|GO:0006355
Mepo5g00708 511 MobiDBLite consensus disorder prediction 486 502 - -
Mepo5g00708 511 MobiDBLite consensus disorder prediction 464 511 - -
Mepo5g00708 511 Pfam AP2 domain 238 293 IPR001471 GO:0003700|GO:0006355
Mepo5g00708 511 Pfam AP2 domain 147 195 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00708 Mepo-Chr5 6811454 6814936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00708 1 332 AP2-EREBP Transcription Factor Family AT4G36920 69.275 3.55e-138 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo5g00708 AP2 7.2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00708 K09284 - gmx:100786333 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00708 5 6811454 6814936 Mepo5g00708 5 6811454 6814936 ECH
Mepo5g00708 5 6811454 6814936 Mepo1g01870 1 18715447 18719109 PCT