Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00706 ATGGACGGTGGAAGAGGAAAAGGAGAGAGAAAGAGAAACGGTGGTGTTGAAGGAGAAAGAAGATACAAAGGAATTCGAATGAGAAAGTGGGGAAAATGGGTAGCTGAAATTCGAGAACCAAACAAACGTTCTCGAATTTGGTTAGGTTCCTATTCTACCCCTATCGCCGCCGCTAGAGCTTACGACACCGCCGTTTTCTATCTCCGGGGACCTTCAGCTCGTCTCAATTTCCCAGAGCTACTCGCCGGTGAAAACAACGCGGTTGTTGGTGGTGGTGATATGTCGGCGGCTACTATTAGAAAGAAAGCTACTGAAGTTGGTGCTAGGGTTGATGCTCTTCAAGCAGATGTTAATCATCATAGTCATAATCATAATCATAATCATAATCATCATCACCTTCAGCATAACCGGAACCAGCATCATCGTGTGATGCCGGTTCCAGAGTTACTTGAAGGTGATGGTTCTGGTGATTTTGCTGAGAGAGTTGATTTAAATAAGATTCCTGAACCAGAGAGTTCTGATGAGTGGGATGTTAATTGA 540 0.4444 MDGGRGKGERKRNGGVEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPIAAARAYDTAVFYLRGPSARLNFPELLAGENNAVVGGGDMSAATIRKKATEVGARVDALQADVNHHSHNHNHNHNHHHLQHNRNQHHRVMPVPELLEGDGSGDFAERVDLNKIPEPESSDEWDVN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00706 179 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
Mepo5g00706 179 PRINTS Ethylene responsive element binding protein signature 60 80 IPR001471 GO:0003700|GO:0006355
Mepo5g00706 179 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Mepo5g00706 179 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Mepo5g00706 179 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Mepo5g00706 179 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Mepo5g00706 179 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Mepo5g00706 179 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Mepo5g00706 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 12 175 - -
Mepo5g00706 179 MobiDBLite consensus disorder prediction 119 140 - -
Mepo5g00706 179 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
Mepo5g00706 179 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00706 Mepo-Chr5 6770814 6771935 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00706 8 175 AP2-EREBP Transcription Factor Family AT5G67190 58.192 6.31e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo5g00706 AP2 4.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00706 K09286 - gmx:100783682 213.772