Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00699 ATGGGACACAAAAACAACAATTTAACAAACAAATTCCAAGAGAATGCAGTTGAAGAAGCTGCTTCTGGTTTACAAAGCATAGATAAACTCATTAAATTACTATCATCATCACAAACATGTTCTTTAAATTCAAACCCTAATTCCATGGACTATAAAACCGTAGCTGATGTAGCTGTTTCAAAGTTTAAGAATGTTATTTCACTTTTGAATCAAAATAGAACAAGAACTGGTCATGCACGTTTCAGAAGAGCACCATTACCTTCTTCTACTACCATTTCTGAAACTAGAGTCTACCATGCTACTCCGTTGCAGCAGATTCCTCCTCTAATCCCCAACAATATTGAAGTTATTGATAAGAATATCATTGATTTTTCTTATTCCTCTCAGGTTTCTTCTTCGTTTGGAAAGTCTTGTGTTTCTTCATGTTCGTTGAAGAGAAAGTGTAGCTCTGAGAATTTTGGTAATGGAAAGTGTGGTAGTTCATCTAGCCACTGTCATTGTTCAAAGAAGAGAAAAATGAGGTTGAAAAGAGTGGTGAGGGTAGCTGCAATAAGTTTGAAGATGGCTGATATTCCAACTGATGAATATTCTTGGAGGAAGTATGGTCAGAAACCTATTAAAGGATCACCTCATCCAAGGGGTTATTACAAGTGCAGCAGTATTAAAGGTTGTCCAGCACGAAAACATGTAGAAAGAGCTTTGGATGATCCATCTATGTTAGTAGTTACTTATGAAGGCGACCACAATCACTCCCTCTCTATGGTTGAAGCTAATAATCTCATCTTAGAATCCTCTTGA 798 0.3659 MGHKNNNLTNKFQENAVEEAASGLQSIDKLIKLLSSSQTCSLNSNPNSMDYKTVADVAVSKFKNVISLLNQNRTRTGHARFRRAPLPSSTTISETRVYHATPLQQIPPLIPNNIEVIDKNIIDFSYSSQVSSSFGKSCVSSCSLKRKCSSENFGNGKCGSSSSHCHCSKKRKMRLKRVVRVAAISLKMADIPTDEYSWRKYGQKPIKGSPHPRGYYKCSSIKGCPARKHVERALDDPSMLVVTYEGDHNHSLSMVEANNLILESS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00699 265 SUPERFAMILY WRKY DNA-binding domain 189 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo5g00699 265 ProSiteProfiles WRKY domain profile. 187 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g00699 265 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 253 IPR044810 GO:0003700
Mepo5g00699 265 Pfam Plant zinc cluster domain 145 190 IPR018872 -
Mepo5g00699 265 SMART WRKY_cls 192 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo5g00699 265 FunFam WRKY transcription factor 65 176 253 - -
Mepo5g00699 265 Gene3D WRKY domain 177 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo5g00699 265 Pfam WRKY DNA -binding domain 194 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00699 Mepo-Chr5 6704330 6706288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00699 14 84 WRKY Transcription Factor Family AT2G24570 45.833 1.42e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo5g00699 WRKY 2.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00699 - - psat:127120421 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00699 5 6704330 6706288 Mepo5g00699 5 6704330 6706288 ECH
Mepo5g00699 5 6704330 6706288 Mepo1g00422 1 4061460 4063052 PCT
Mepo1g01861 1 18554444 18556579 Mepo5g00699 5 6704330 6706288 PCT