Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00691 ATGGAACCCGCTCCTCCATCTTCGAAGACTGAACCTTACTCCGCCAAAGTGCCTGCTGAAAATGACAATGCACGTGATTCACCATCCTTGTCACCAGTTTCTAGTATATCTTCCTGGGCGAGAAATCTGAGGTTTGGGGCTGCAGATCAGAACTCACAGACTGAGAACAATGGCATGTCGGCATTTGCTCGTCTTACTAGTGGGATTGGACTACGAAGTCCCTCAAATGAGCTTGCTACGAGCAGTTCAGGAGCCGAGCAACCTAATATAATTGAATCATTCACTAAAGGGTTGGTGGACTCTTCAAAGGAAGCAGTAAAGGCAGTGCAGACCAAAGCACGACATATTGTTTCTCAAAATAAACGCAGATACCAGGAAGGTGGATTTGATTTGGATATGACATACATCACTGAAAATATAATAGCTATGGGATTTCCTGGTGGTGATTTTAGCTCTGGAATTTTTGGGTACATTGAGGGGTTCTATCGAAATCACATGGAAGAAGTAATCAAGTTTTTTGAAACTCATCACAAGGGAAAGTACAAAGTATACAATCTTTGTTCAGAGAGGTTGTACGATGGATCACTTTTCCAGGGGAAGGTTGCAAGTTTCCCATTTAGTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCGAAGTGCATATTCATGGTTGAAGGAGGATATCCAAAATGTGGTCGTTGTTCATTGTAAAGCTGGTATGGGAAGGACAGGACTGATGATTTGTAGCCTTCTTTTGTATCTTAAGTTTTTCCCCACTGCTGAGGAAGCCATTGATTCCTTTAACCAGAAAAGATGTGTAGATGGAAAGGCTCTAACTCTCCCAAGTCAAATTAGATATGTCAAATATTTTGAACGGACCTTAACACACTTCAACGGAGAAGTCCAGCCTGGACGAAGGTGTATGCTGAGAGGGTTTCGGCTTCACAAATGCCCTTATTGGGTTAGACCATCCATTACAATTTCTGATCATAACGGAATTCTTTTCACAACTAGAAAGCATCCCAAGACAAAGGATCTAATGCCAGAAGATTTTTGGATCAATGCATCAAAGAAAGGAATTTTGGTCTTTGCATTACCAGGGGAGCCAGGTCTGACAGAATTGGTTGGGGACTTCAAAATTCATTTTCATGATCGACAGGGAGATTTCTACTGTTGGATGAATACAACAATGATAGAGAACAGAAAAATTTTAGATGGCTCAGATCTTGATGATTTTGACAAGAGAAAGATCCCAGCTCCAGGGTTCCAGGTCGAAGTTGTGATGGTAGACTATGATGGCACCCTACCTGGAAAAGTCAACCCTGCAAGCAAAGGATCTGACATAAGCAATGTCTCATCTGGTGCAAAGCCAACATCTAATTCAAGTAAGAGTAAGATACCTAAAAATGGAGATGATGATGTATTCTCAGATAGCGATGAAGAGGAGACCAAGGGAACACAAAGGAAGGAAGCTACAACTGATTACAAATATATGGAACCTCATCAAGCATCTGAGGCCACTACTGACCATGTAGGCATGTTGTCGCGCGCAACGGATCAGTTGTCACTCCAGCAGCATGAGGAACGTACGGAAAACAATGTTTCTGAAGCATCAACTACAGATAAACTTCATAATATTCATGCAGGTCCTAACACCACCAACATGGAATCTATAGGGACAAGTGAATTCAAGGCAATTGCAGCAGATGCTTCAGTTTTTTCTTTTGGAGATGAAGATTTTGAGAGTGATTGA 1764 0.4161 MEPAPPSSKTEPYSAKVPAENDNARDSPSLSPVSSISSWARNLRFGAADQNSQTENNGMSAFARLTSGIGLRSPSNELATSSSGAEQPNIIESFTKGLVDSSKEAVKAVQTKARHIVSQNKRRYQEGGFDLDMTYITENIIAMGFPGGDFSSGIFGYIEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDGSLFQGKVASFPFSDHNCPPIQLIASFCRSAYSWLKEDIQNVVVVHCKAGMGRTGLMICSLLLYLKFFPTAEEAIDSFNQKRCVDGKALTLPSQIRYVKYFERTLTHFNGEVQPGRRCMLRGFRLHKCPYWVRPSITISDHNGILFTTRKHPKTKDLMPEDFWINASKKGILVFALPGEPGLTELVGDFKIHFHDRQGDFYCWMNTTMIENRKILDGSDLDDFDKRKIPAPGFQVEVVMVDYDGTLPGKVNPASKGSDISNVSSGAKPTSNSSKSKIPKNGDDDVFSDSDEEETKGTQRKEATTDYKYMEPHQASEATTDHVGMLSRATDQLSLQQHEERTENNVSEASTTDKLHNIHAGPNTTNMESIGTSEFKAIAADASVFSFGDEDFESD 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00691 587 MobiDBLite consensus disorder prediction 442 561 - -
Mepo5g00691 587 MobiDBLite consensus disorder prediction 540 561 - -
Mepo5g00691 587 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 99 545 - -
Mepo5g00691 587 MobiDBLite consensus disorder prediction 484 500 - -
Mepo5g00691 587 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 107 304 - -
Mepo5g00691 587 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 378 432 IPR035892 -
Mepo5g00691 587 ProSiteProfiles C2 tensin-type domain profile. 308 435 IPR014020 -
Mepo5g00691 587 MobiDBLite consensus disorder prediction 1 34 - -
Mepo5g00691 587 CDD PTP_PTEN 132 296 IPR045101 GO:0016791
Mepo5g00691 587 SMART PTEN_C2_2 306 434 IPR014020 -
Mepo5g00691 587 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 135 301 IPR029021 -
Mepo5g00691 587 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 236 275 IPR000387 GO:0016311|GO:0016791
Mepo5g00691 587 ProSitePatterns Tyrosine specific protein phosphatases active site. 238 248 IPR016130 GO:0016311|GO:0016791
Mepo5g00691 587 Gene3D Protein tyrosine phosphatase superfamily 107 304 IPR029021 -
Mepo5g00691 587 ProSiteProfiles Phosphatase tensin-type domain profile. 122 301 IPR029023 -
Mepo5g00691 587 MobiDBLite consensus disorder prediction 447 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00691 Mepo-Chr5 6649087 6655347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00691 21 587 Protein tyrosine phosphatase (PTP) family AT3G19420 61.993 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00691 K01110 - gmx:100801622 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00691 5 6649087 6655347 Mepo5g00691 5 6649087 6655347 ECH
Mepo5g00691 5 6649087 6655347 Mepo4g04608 4 55654374 55661093 PCT