Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00674 ATGTCTCACCAACAACCTCTGTTAGAACAACAAGAAGAAGAAACCGCTTATGATTCATCTGAAAAGGTTGTCGTTGCCGGAACCGACGAAGAAGAAGCCTATGAAGCTGACGTGGACTCTGGAGTACGAATTCCACCGTTTTCATGGAAGAAACTATGGTTATTCAGTGGACCAGGTTTTCTAATGAGTATAGCATTTTTGGATCCTGGAAACTTGGAAGGAGATCTTCAATCTGGTGCAATTGCTGGGTATTCTTTGTTATGGCTTCTTATGTGGGCTACGGCTATGGGCCTTTTGATTCAGCTTTTGTCAGCAAGGTTAGGTGTTGCTACGGGAAGACATTTGGCTGAACTTTGTAGAGATGAGTATCCTACTTGGGCTAGGATTGTTCTTTGGTTGATGACTGAAGTTGCTTTAATTGGTTCTGATATTCAAGAGGTTATAGGGAGTGCTATTGCTATTAGGATTTTGAGTAATGGTCTTGTTCCTCTTTGGGCTGGTGTTGTCATTACTGCTTTAGATTGTTTCATTTTTCTCTTTCTTGAGAACTATGGTGTGAGGAAATTGGAAGCTTTTTTTGCTGTTCTGATAGCTATTATGGCTCTCTCATTTGCTTGGATGTTTGGTGAAGCAAAGCCAGATGGTGTTGATGTTCTTGTTGGTATTTTGGTTCCTAAACTTAGCTCCAGAACTATACAACAAGCTGTTGGAGTTGTTGGTTGCATTATTATGCCTCACAATGTATTCTTGCATTCTGCTCTTGTTCAATCCAGGCAGGTTGACCCCAAAAAGAAAGGCCGTGTTCAAGAAGCTCTCAATTACTACTCCATAGAGTCCACCATTGCGCTCGTTGTTTCCTTTATTATTAATATATTTGTCACAACTGTGTTTGCTAAGGGCTTTTATGGTACTGAAATAGCAAATAGGATCGGTCTCGTAAATGCAGGGCAGTACCTTCAGGAGAAGTATGGAGGCGGAGTATTCCCAATCCTGTATATATGGGGTATTGGGTTATTAGCAGCTGGTCAGAGTAGCACTATTACTGGTACATATGCTGGACAATTCATCATGGGTGGTTTTCTGAATTTGAAGTTGAAAAAATGGATGAGGGCGTTGATTACTCGGAGTTTCGCAATCGTCCCGACTATGATAGTTGCACTTATATTTGATTCTTCAGAGGAATCATTAGATGTTTTGAATGAATGGCTTAATGTTCTTCAGTCAGTGCAAATCCCTTTTGCATTGATTCCCTTGCTTTGTTTGGTTTCAAAGGAACAAATAATGGGCACTTTCAAGATTGGCTCTGTCCTCAAGACTGTTTCCTGGCTTGTGGCTGCTCTGGTGATAGTGATAAATGGCTATCTTTTGCTGGAATTCTTTTCCTCTGAAGTGAGTGGAGCAGTGTTCACAACTGTTGTGTGCGTAATAACAGCGGCATACGTTGCATTCATAATTTACCTTATTTCAAGCTCCGTTACGTTTTCACCTTGGCAAAGATTAACTCGATCAAAGACAGTTACCACCACGGAGAGTTGA 1536 0.4102 MSHQQPLLEQQEEETAYDSSEKVVVAGTDEEEAYEADVDSGVRIPPFSWKKLWLFSGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCRDEYPTWARIVLWLMTEVALIGSDIQEVIGSAIAIRILSNGLVPLWAGVVITALDCFIFLFLENYGVRKLEAFFAVLIAIMALSFAWMFGEAKPDGVDVLVGILVPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRQVDPKKKGRVQEALNYYSIESTIALVVSFIINIFVTTVFAKGFYGTEIANRIGLVNAGQYLQEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLKLKKWMRALITRSFAIVPTMIVALIFDSSEESLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGTFKIGSVLKTVSWLVAALVIVINGYLLLEFFSSEVSGAVFTTVVCVITAAYVAFIIYLISSSVTFSPWQRLTRSKTVTTTES 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00674 511 Hamap Divalent metal cation transporter MntH [mntH]. 38 460 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo5g00674 511 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 45 491 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo5g00674 511 MobiDBLite consensus disorder prediction 1 22 - -
Mepo5g00674 511 NCBIfam Nramp family divalent metal transporter 57 426 - -
Mepo5g00674 511 Pfam Natural resistance-associated macrophage protein 73 434 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo5g00674 511 PRINTS Natural resistance-associated macrophage protein signature 131 157 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo5g00674 511 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo5g00674 511 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo5g00674 511 PRINTS Natural resistance-associated macrophage protein signature 161 180 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo5g00674 511 PRINTS Natural resistance-associated macrophage protein signature 186 207 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo5g00674 511 PRINTS Natural resistance-associated macrophage protein signature 404 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo5g00674 511 PRINTS Natural resistance-associated macrophage protein signature 235 258 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo5g00674 511 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 50 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00674 Mepo-Chr5 6475195 6480514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00674 22 497 Inorganic Solute Cotransporters AT2G23150 81.513 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00674 K21398 - gmx:100807811 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00674 5 6475195 6480514 Mepo5g00674 5 6475195 6480514 ECH
Mepo5g00674 5 6475195 6480514 Mepo1g01833 1 18225305 18228905 PCT