Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00669 ATGTCTCTATTTACCAAAAACTTCCTATTGTTGTTTGTGTTGGCATTGTTATTTGTGCACGATGCTCTTGGAGTGGGTGTGAATGTTTTTTTTGACGGGAGAGTGCGTGTGAATGTTACTAACTCTTTGGAGGACAATCTTGACTTAAACCTTCATTGCAAATCTAAAGCAAAAGATCTTGGAACTCATTCTCTTCATCATGGTGAAAGTTTTGGTTGGAAGGTTGGAATCCTTGAGGAACTGTACTATTGTTCTTTTCAATGGAATGGTAGTAGATTGTTTTATTATGATATGTACTTAGCAAGTAGAGATATATCTGATAATTTGAATTGGGTATTGCTTGAATTTTGGGCCTTTTCAGATGTTTATTGCAGGGGACAAGATGGATTGGCTATGTGGACTGGAGGAACAGACCTGCCCACAGAGGCAGACATGGTGGCATGCTTGCAGCCTCCTTTATTTTGGTCAATGCAAAATGGAGATCCGTCTTGGATCGGTTACATCTACGCCTTCTCCATATTTGTTGGAGTGTCAGTTGGTGCTCTATGTGAGGCACAATATTTCAAGAATGTTATGTGTGTTGGTTTTCGGCTTAGATCAACACTGGTAGCGGCTATATTCAGAAAATCTTTGAGGCTAACTCATGAAAGTAGAAAGAAGTTCTCAATGGGGAAGCTTATGAATATGATAACAACTGATGCCAATGCATTACATGAAACTTCAACAGTTCTTAAGGAACCTATTGGATTTGTGTATACAAATGAGGATTTAATTAACAGAAGGAATTTGCCTCGAGGTTTGCAATTGGTGAAAACAAGGGAGCACGTGTCTACAAGGGTATTGTCAGCCACAACCAAGGAAGATCAAGCTGAAAAGGATGCCACCATCAAACTTGTGATGGATGAAATTAAGCAAGGAAATCAAGGTGGTGAGAGTACCTTGGAGAAAGCCGATGCAACTGGTGAAAATGTAAATGGGGAAGATGCTGTTGATGTTGATGATAATGATGGGAAACTCGCTAAATCGTCTCATGATTCTATTCAAGAGCCTTTAGTTAAGGTAGGTGATATATTTGAAAAGTACATTAAGTTTGATACGTTCACTCCCGCAGCAGAACGAGGGCTTCCAGTTACTAGAGTTATTAGTCAAATGGCTTTGCAAGAGATTCTTGCCCGTGCAGTCGGGGATGATGTCATTATGAATGGTAGTAATGTTGTCGATTTAGTTGATCATGAAACTAAGGTGCGGACAAAGTTATTTGGGGCAACAGAAGCTACATACTCGGGCTATACCTGTTATACTAGTATAGCAGACTTTGTGCCACCTGACATTGAATCGGTTGGGTACCAAGTATTCTTAGGACACAAACAATACTTTGTATCTTCAGACATCGGTGATGTGAAGTATTATTGGCACTCCATTATAAAATCAAGACACAAGTATGAGCAAGAAGCTAATAGACCTATTGATAAGATACAAAGGCGTCTTGCACAAAGTCGAGAAGCTGCACGTACGAGCCGTCTGCGAAAAAAGGCTTATGTGCAGCAGCTAGAATCGAGTCGTTTGAAGTTGGTGCAGTTGGAGCAAGAGCTCGGACGTGTTAGACAGCAGGAAGGGTTGAAACATGATGCAAACAACCAGAAATTGGTTGAAGGGGTTCTAAGTTGTGTGAGGCAAATTAATAGAACCAGTCGTGGAGATGTAACTCCTGAAGAGTTGAAGGAGAGACAGGCTAAGGCAATGTCAGATCCAGAGAATCAGAACATCCTTCAAGACCCTGTTATGAGACAGGTATTGGTTGATTTCCAGGAAAATCCTAAGGCTGCACAGGGACATACCAAGAACCTGGGTGTGATGGAATTGTCCAGATGA 1872 0.4097 MSLFTKNFLLLFVLALLFVHDALGVGVNVFFDGRVRVNVTNSLEDNLDLNLHCKSKAKDLGTHSLHHGESFGWKVGILEELYYCSFQWNGSRLFYYDMYLASRDISDNLNWVLLEFWAFSDVYCRGQDGLAMWTGGTDLPTEADMVACLQPPLFWSMQNGDPSWIGYIYAFSIFVGVSVGALCEAQYFKNVMCVGFRLRSTLVAAIFRKSLRLTHESRKKFSMGKLMNMITTDANALHETSTVLKEPIGFVYTNEDLINRRNLPRGLQLVKTREHVSTRVLSATTKEDQAEKDATIKLVMDEIKQGNQGGESTLEKADATGENVNGEDAVDVDDNDGKLAKSSHDSIQEPLVKVGDIFEKYIKFDTFTPAAERGLPVTRVISQMALQEILARAVGDDVIMNGSNVVDLVDHETKVRTKLFGATEATYSGYTCYTSIADFVPPDIESVGYQVFLGHKQYFVSSDIGDVKYYWHSIIKSRHKYEQEANRPIDKIQRRLAQSREAARTSRLRKKAYVQQLESSRLKLVQLEQELGRVRQQEGLKHDANNQKLVEGVLSCVRQINRTSRGDVTPEELKERQAKAMSDPENQNILQDPVMRQVLVDFQENPKAAQGHTKNLGVMELSR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00669 623 Pfam Plant self-incompatibility protein S1 37 108 IPR010264 -
Mepo5g00669 623 SUPERFAMILY Leucine zipper domain 492 530 IPR046347 GO:0003700|GO:0006355
Mepo5g00669 623 Gene3D - 491 542 - -
Mepo5g00669 623 Gene3D ABC transporter type 1, transmembrane domain 135 250 IPR036640 GO:0005524|GO:0016020
Mepo5g00669 623 FunFam BZIP family transcription factor 490 540 - -
Mepo5g00669 623 SUPERFAMILY ABC transporter transmembrane region 158 241 IPR036640 GO:0005524|GO:0016020
Mepo5g00669 623 Coils Coil 510 537 - -
Mepo5g00669 623 Pfam ABC transporter transmembrane region 157 240 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo5g00669 623 Gene3D - 563 622 - -
Mepo5g00669 623 PANTHER - 414 488 - -
Mepo5g00669 623 Pfam STI1 domain 575 619 IPR041243 -
Mepo5g00669 623 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 566 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00669 Mepo-Chr5 6428292 6434548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00669 472 537 Calmodulin-binding Proteins AT5G65210 70.588 2.76e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00669 K09838 - gmx:100820171 178.333