Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00657 ATGACGCAATTCACATCAACATTTCCACCTTTTCACCAAACCACACACTTTTCCAACCCTACCATGAACAAAAATCAAATCCCTGTCGTTATTAGTCCTTGTTCAGAATTTCCCACACCTAATAATCCTCTACTACACTTCAACAATGCCAATTGCATGGAGCAGTTACTCATTCACTGTGCCAATGCAATAGAAAGCAACAATGCAACACTAGCACAACAAATCCTTTGGGTCCTTAACAACACAACACCCTCAGATGACAACTCCAATCAACGCCTAGCAGGAAGCTTCATTCGAGCTCTCACATTGCGCGCAGCAAAATCCTGTAGTTGCAATATTCCAGAAGCAGTTACACAAACCGCAAATAGTTATAACTATCATCACAATCTCGCCATACAAACACACGAGTTTTCTGTCATTGAGTTAGCAAATTTTATTGATTTAACGCCTTGGCATCGTTTCGGTTACACAGCAGCTAATTCTGCAATTCTAGAAGCTACTAAAGGATTTACAGTTATTCACATTGTCGATTTGAGTTTAACACATTGCATGCAGATTCCAACACTAATCGACGCCATTGCAAATCATTACGAGGTTCCTCCTTTAATCAAGCTAACAGTTGCAGTTAATAACTGTAGGAATAAGAATATTAATCATATTCCAATTCCACCGATGCTTGATCTTTCTTACGACGAATTGGGTTCAAAATTGGTTAATTTTGCTAAAACAAGAAGCGTGATTATGGAATTCAAAGCTGTTTCTTCAACTTATTCAGACGGATTCGCTTCATTGATTGAACACCTACGAGTGCAAGTGCAACATTATAATAAATCTCATGAAGCATTGGTTATAAACTGTCACATGATGCTTCATTATATTCCTGAAGAAACTCTATCTACAATAAATGATACAAATTCAAATATGAATTTGAATTTGAACTCTTGTTCCTCACTGCGCTCGATGTTTTTAGAAGCTGTACGGATGTTAGATCCAACAATAGTCGTCTTGGTGGATGAAGATGCAGATTTAACATCAAGTGGTTTGGTTAGTAGACTAAAATCCGCGTTTAATTATCTTTGGATACCGTTTGACACGGTGGACATATTTTTACCACGAGGGAGTAAACAAAGGCAGTGGTATGAAACAGGTATTTGTTGGAAGGTTGAGAATGTGATAGCATATGAAGGGATTCAGAGAGTTGAGAGAGTCGAGCCTAAAAACAAGTGGAAGCAACGAATGAGAAATGCACATTTTCAAGGGGTTTGTTTCAGTGAGGATTCGGTTTTGGAGGTTAAGGGTATGCTTGATGAACATGCAGTTGGATGGGGATTGAAAAAAGAAGATGATTTTCTTGTGCTTACTTGGAAAGGACATAATGTTATATTTGCTTCTGTTTGGTTACCTTCTTGA 1410 0.3801 MTQFTSTFPPFHQTTHFSNPTMNKNQIPVVISPCSEFPTPNNPLLHFNNANCMEQLLIHCANAIESNNATLAQQILWVLNNTTPSDDNSNQRLAGSFIRALTLRAAKSCSCNIPEAVTQTANSYNYHHNLAIQTHEFSVIELANFIDLTPWHRFGYTAANSAILEATKGFTVIHIVDLSLTHCMQIPTLIDAIANHYEVPPLIKLTVAVNNCRNKNINHIPIPPMLDLSYDELGSKLVNFAKTRSVIMEFKAVSSTYSDGFASLIEHLRVQVQHYNKSHEALVINCHMMLHYIPEETLSTINDTNSNMNLNLNSCSSLRSMFLEAVRMLDPTIVVLVDEDADLTSSGLVSRLKSAFNYLWIPFDTVDIFLPRGSKQRQWYETGICWKVENVIAYEGIQRVERVEPKNKWKQRMRNAHFQGVCFSEDSVLEVKGMLDEHAVGWGLKKEDDFLVLTWKGHNVIFASVWLPS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00657 469 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 456 IPR005202 -
Mepo5g00657 469 ProSiteProfiles GRAS family profile. 44 467 IPR005202 -
Mepo5g00657 469 Pfam GRAS domain family 53 466 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00657 Mepo-Chr5 6255106 6256515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00657 35 468 GRAS Transcription Factor Family AT3G49950 56.064 6.45e-167 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo5g00657 GRAS 1.7e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00657 - - mtr:11421838 843.958