Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00648 ATGGCTAACATGAATGGCAAATCACTCCGGAATGCCAAGAAATTCATTCCGATACCACCTCCTTCGCCTCGATCAGCAGCAACCGGTTATCCTTGCGAGTATGCGGCAATGAATAATTTATCACCGAGAGGGCGAAGCAGCTGTGTCTCTTCTGCAACAAGAGATCTGTGGGAGCGTCTTTTCAATGAAGGGTATAAAGCCGATGTTTGCATTAATACTGATAATGGTGGCATTGTTTATGCTCATTCTAACATTATTGCGGTGGCTTCTCCTGTATTGAGAGGCATGCTGAAGCAAGCAAATCGTTCCAATCGGTGGCGATCGATCTCAATCTTTGGGGTTCCACATGATGCAGTACGAGTTTTTATTCGATATTTGTACTCTTCCTGTTACGAGAAAGAAGAAATGAAGGAATTTGTCCTACATTTGTTGGTGCTTTCTCATGTATACATGGTCCCTCACTTGAAGCGTGAATGTGAACAGAAGCTAGAATTGGGTTTACTCACCATGGATAATCTAGTTGATGTATTTCAACTTGCATTACTGTGTGATGCTCCGCGGCTCAGTCTCATTTGTCACCGTAAAATACTAAAGAACTTCAAAACTGTTTCGGAGTCAGAAGGATGGAAAGCAATGAAGCAGAGTCACCCAGTTCTAGAAAAGGAAATTCTGGAATCAATGATTGAAGAAGAAAATAGTAAGAAGGATAGGATCAGAAAAATGAATGAAAGAGAGGTCTATTTGCAATTATACGATGCAATGGAAGCTCTAGTTCACATATGTAGAGATGGTTGTCGAACTATTGGCCCGCATGACAAAGACTTCAAAGCAAACCAGCCGTGTAGGTATACATCCTGTAAAGGGCTAGAATTGCTTGTTCGTCATTTTGCTGGTTGCAAATTGAGAGTCCCGGGGGGTTGTGCTCATTGCAAAAGGATGTGGCAACTGTTGGAGCTGCATTCTCGACTATGTGCTGATCCAGATTTCTGTAGAGTTCCTTTGTGCAGGAACTTTAAGCAGAGAATATCAAAACAAAGCAAGAAAGACGAAATTAGATGGAAAATTTTAGTTGAAAAGATCTTGAAAACAAGAGGAATTGGGATTGCACCATGCTTTCGGCCACAATGA 1128 0.4167 MANMNGKSLRNAKKFIPIPPPSPRSAATGYPCEYAAMNNLSPRGRSSCVSSATRDLWERLFNEGYKADVCINTDNGGIVYAHSNIIAVASPVLRGMLKQANRSNRWRSISIFGVPHDAVRVFIRYLYSSCYEKEEMKEFVLHLLVLSHVYMVPHLKRECEQKLELGLLTMDNLVDVFQLALLCDAPRLSLICHRKILKNFKTVSESEGWKAMKQSHPVLEKEILESMIEEENSKKDRIRKMNEREVYLQLYDAMEALVHICRDGCRTIGPHDKDFKANQPCRYTSCKGLELLVRHFAGCKLRVPGGCAHCKRMWQLLELHSRLCADPDFCRVPLCRNFKQRISKQSKKDEIRWKILVEKILKTRGIGIAPCFRPQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00648 375 CDD BACK 171 226 - -
Mepo5g00648 375 Gene3D Potassium Channel Kv1.1; Chain A 43 167 IPR011333 -
Mepo5g00648 375 Pfam TAZ zinc finger 252 335 IPR000197 -
Mepo5g00648 375 ProSiteProfiles Zinc finger TAZ-type profile. 241 338 IPR000197 -
Mepo5g00648 375 SUPERFAMILY TAZ domain 244 344 IPR035898 -
Mepo5g00648 375 SUPERFAMILY POZ domain 47 163 IPR011333 -
Mepo5g00648 375 Gene3D - 168 241 - -
Mepo5g00648 375 SMART BTB_4 67 167 IPR000210 GO:0005515
Mepo5g00648 375 Pfam BTB/POZ domain 59 163 IPR000210 GO:0005515
Mepo5g00648 375 Gene3D TAZ domain 242 363 IPR035898 -
Mepo5g00648 375 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 43 367 IPR044513 -
Mepo5g00648 375 FunFam BTB/POZ and TAZ domain-containing protein 2 169 239 - -
Mepo5g00648 375 FunFam BTB/POZ and TAZ domain-containing protein 2 241 365 - -
Mepo5g00648 375 Coils Coil 221 244 - -
Mepo5g00648 375 FunFam BTB/POZ and TAZ domain-containing protein 3 46 166 - -
Mepo5g00648 375 SMART TAZ_2 244 336 IPR000197 -
Mepo5g00648 375 ProSiteProfiles BTB domain profile. 67 135 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00648 Mepo-Chr5 6142856 6147304 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Mepo5g00648 BTB 2.7e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00648 - - lja:Lj2g3v1968190.1 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00648 5 6142856 6147304 Mepo5g00648 5 6142856 6147304 ECH