Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00647 ATGGGGAGCTATGTTGGCACCTCTTTTTCTTTGTCTAGTCTCATGTGTCATGAACAAGATGAATCCACTCTCATCTTTGAAGATGATGAAGATGAAAACACTTTCTTCATTAATTCATCACTTGATAATAACAATAACCCTTGGTTTCTTTTGGATGATGAAGAAGAATACATTGAATATTTGTTCAAACAAGAAACAGTATTTGGATCTTCCATGACTCATTTGTTATCCTATGATGATCATGATGTTGATGTTGAAGATGATGATTCAAGCAAAAGCTTGTTCTGGTTGAGAAATGCTCGTTTGCATGCTATTGATTGGATTTTCAATACACAAGCTAAATTTGGATTCACAGTTCAAACAGCCTATTTATCAATCAATTATTTTGATCGGTTTCTTTCAAAACGATCCATTGATGAATCAAAACCTTGGGCTATTCAATTGTTGTCAGTGGCATGTTTATCAATTGCAGCAAAAATGGAAGAACAAAGTGTTCCTCCACTATCAGAATATCCAATAGAATATCGATTTGAGAATAAAGTTATCAAGAACATGGAACTTTTGATTTTGAGTACTTTGGAATGGAAAATGGGATTACCAACCCCTTTTGCTTATTTGCATTATTTCTTCACCAAGTTTTGCAATGGATCAAGATCAGAAATAATAATCACAAAGGCCACACAACACATTGTGACATTGGTCAAAGGTTTTAATTTGATGAATCAACGACCATCTATAATTGCATCTGCTTCTATATTAGCAGCTTTTGATTCCACATTAACCAAAAAGGAAATTAATCTTCGGATTAGTTTAATCTCATCATGTGGAAATCTAGAAAGTGAGCATGTATTTTCATGTTACAATGTTATACAAGAAAAGATGAGAGACAAAGTTAACAAGACACCTTCATCGGATTTACTATCGACAGAATCAAATTCCATAAGTGTTGTTGTTGAAAACAAATCTAATGCTTGTGCAGGAGTTAAGAGAAAGCTTAGTTATGAGGAGATGAACATTGAAGATTTTCCTCCAGGACAAAAGCTACGTCAACCTTAA 1056 0.3362 MGSYVGTSFSLSSLMCHEQDESTLIFEDDEDENTFFINSSLDNNNNPWFLLDDEEEYIEYLFKQETVFGSSMTHLLSYDDHDVDVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSRSEIIITKATQHIVTLVKGFNLMNQRPSIIASASILAAFDSTLTKKEINLRISLISSCGNLESEHVFSCYNVIQEKMRDKVNKTPSSDLLSTESNSISVVVENKSNACAGVKRKLSYEEMNIEDFPPGQKLRQP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00647 351 CDD CYCLIN_AtCycD-like_rpt1 100 195 - -
Mepo5g00647 351 SUPERFAMILY Cyclin-like 45 197 IPR036915 -
Mepo5g00647 351 Pfam Cyclin, N-terminal domain 99 197 IPR006671 -
Mepo5g00647 351 Gene3D - 99 198 - -
Mepo5g00647 351 PANTHER CYCLINS 54 298 IPR039361 -
Mepo5g00647 351 Pfam Cyclin, C-terminal domain 200 299 IPR004367 -
Mepo5g00647 351 FunFam Cyclin-D5-1 96 198 - -
Mepo5g00647 351 SMART cyclin_7 106 191 IPR013763 -
Mepo5g00647 351 CDD CYCLIN_AtCycD-like_rpt2 201 290 - -
Mepo5g00647 351 SMART Cyclin_C_2 200 345 IPR004367 -
Mepo5g00647 351 Gene3D - 199 287 - -
Mepo5g00647 351 ProSitePatterns Cyclins signature. 101 132 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00647 Mepo-Chr5 6115393 6117088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00647 10 273 Core Cell Cycle Gene Families AT4G37630 37.050 1.12e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00647 K18811 - gmx:100798140 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00647 5 6115393 6117088 Mepo5g00647 5 6115393 6117088 ECH