Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00639 ATGGGGAAGAAGCAACACAGCAAAGACCGAATGTTCTTAACCAAAACTGAGTGGGCAACGGAATGGGGAGGTTACAAATCCAAAGAAAATCGAACGGTTTTCAAACGTCTTCCTTTTTATTGCTGCGCACTTACGTTTACTCCGTTCGAGTTTCCAGTTTGTACACCTGATGGCAGCGTCTTCGATGTTATGAACATAACTCCATATATTATAAAATATGGTAAACATCCTGTTACTGGAGCTCCCTTGAAGCAGCAAGATCTCATTCCACTAACTTTTCACAAGAACTCAGAAGGAGAATATCACTGTCCAGTGCTAAACAAAGTTTTCACTGAATTTACACACATTGTGGCAGTCAAAACTACTGGAAATGTCTTCTGCTATGAGGCTGTTAAAGAGTTAAACATCAAGACAAAAAATTGGAAGGAGCTCCTCACCGACGAGGCATTTACTAGGGATGACCTTATAACAATTCAGAATCCTAATGCACTTGACCAGAAGGTTCTTCTGGATTTTGATCATGTTAAACAAAATTTGAAAATTGATGATGAAGAACTACAGAAAATGAGTTCAGATCCAGCCTATAATATAAACATGTCGGGGGATATCAAACAAATGCTTAAAGAGCTTGGAACTGAGCAAGGAAAGGAAACTGCATTGCATGGGGGAGGTGGTGGAAAGGCACAAAAAGAAAGGGCCGCTGCACTTGCTGCCATCTTAGCTGCACGGTCACAAGTTAAAGAAGATTCCAAATCGACCGATGGAGCTCCTCAGGCACTCAGTATTGTAGATGCTGCATCTGCCGCAGTACATGGAAGAAGTGCGGCTGCTGCTAAAGCCTCATCAAGTGATAAAACTGCTGCCAGAATAGCTATGCACGTGGCTGGTGACAGGGCACCAGTGAATGCAAAGATGGTTAAAAGTCGTTACACTACTGGTGCTGCTTCTCGGTCTTTTACTTCTACATCATATGATCCGGTTACAAAAAATGATTATGAATATGTGAAAGTTGAGAAGAATCCAAAGAAGAAGGGATATGTACAACTGCATACAACACACGGTGATTTGAACATTGAGCTACACTGCGATATAGCACCCCGGGCATGCGAGAACTTCATCACGCTTTGTGAACGTGGATATTATAACGGAGTTGCTTTTCATAGAAGCATTAGGAATTTTATGATACAAGGTGGTGATCCTACTGGTACTGGTAGAGGCGGTGAATCAATTTGGGGAAAGCCTTTTAAGGATGAACTTAACTCCAAATTAGTCCACTCTGGAAGGGGTGTGGTTAGCATGGCAAACAGTGGCCCACATACTAATGGTTCCCAGTTTTTCATATTGTACAAATCTGCAAATCATTTAAACTTCAAACATACAGTTTTTGGAGGCGTGGTTGGTGGATTGACTACACTAGCAACAATGGAAAAGGTTCCTGTTGATGACAGTGACCGACCTCTGGAGGAAATCAAGATAACAGGTGCCACAACTTTTGTCAATCCTTACACCGAGCCAGATGAGGAAGAAGAGCAAGCTAATGCCAAAGATAAGAATGCAAATGATGAAGAAAATGTTTGTTCCATAATATTTGAGATTACTCATTGTTTATATTTTTCTCTCTCACTTTTACAAGGTTTTTGTGAACTAATCCTTTGA 1656 0.4106 MGKKQHSKDRMFLTKTEWATEWGGYKSKENRTVFKRLPFYCCALTFTPFEFPVCTPDGSVFDVMNITPYIIKYGKHPVTGAPLKQQDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAVKELNIKTKNWKELLTDEAFTRDDLITIQNPNALDQKVLLDFDHVKQNLKIDDEELQKMSSDPAYNINMSGDIKQMLKELGTEQGKETALHGGGGGKAQKERAAALAAILAARSQVKEDSKSTDGAPQALSIVDAASAAVHGRSAAAAKASSSDKTAARIAMHVAGDRAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNDYEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTTLATMEKVPVDDSDRPLEEIKITGATTFVNPYTEPDEEEEQANAKDKNANDEENVCSIIFEITHCLYFSLSLLQGFCELIL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00639 551 CDD cyclophilin_RING 346 504 - -
Mepo5g00639 551 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Mepo5g00639 551 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 381 398 IPR020892 GO:0003755|GO:0006457
Mepo5g00639 551 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 327 511 - -
Mepo5g00639 551 Pfam U-box domain 39 90 IPR003613 GO:0004842|GO:0016567
Mepo5g00639 551 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 340 511 IPR044666 -
Mepo5g00639 551 SUPERFAMILY Cyclophilin-like 346 506 IPR029000 -
Mepo5g00639 551 Gene3D - 326 511 IPR029000 -
Mepo5g00639 551 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 429 444 IPR002130 GO:0000413|GO:0003755
Mepo5g00639 551 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 457 472 IPR002130 GO:0000413|GO:0003755
Mepo5g00639 551 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 386 398 IPR002130 GO:0000413|GO:0003755
Mepo5g00639 551 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 444 456 IPR002130 GO:0000413|GO:0003755
Mepo5g00639 551 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 360 375 IPR002130 GO:0000413|GO:0003755
Mepo5g00639 551 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 350 497 IPR002130 GO:0000413|GO:0003755
Mepo5g00639 551 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Mepo5g00639 551 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Mepo5g00639 551 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
Mepo5g00639 551 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 346 496 IPR002130 GO:0000413|GO:0003755
Mepo5g00639 551 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
Mepo5g00639 551 SUPERFAMILY RING/U-box 37 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00639 Mepo-Chr5 6019572 6027059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00639 1 503 U-box Gene Family AT5G67530 82.306 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00639 K10598 - gmx:100819923 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00639 5 6019572 6027059 Mepo5g00639 5 6019572 6027059 ECH