Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00638 ATGGATACATTGTTTAGACTTGTCAGTTTCCAACCACACCAACAACAACAACAACAACAAGAAGATCAATCTCTCAACTCCACCACCAGCAGAACAACAACATCAAGTAGCTCTCGATCCTCAAAACAAAACTATCATCAATATTACAATCCACAAGAAGTTGAAGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTTTCATCATCTTCTTCCAAACACTACTATCCTTATAATCAACCTCAAACTTCAAATACCATTACTACAAACACCCCCACACCATCACTCACACCCCCTCCACCAACAACTGATTTCACCTTCGAATTAACAGGAAAGTGGGCCAACAACATCCTACTTGAAACAGCACGAGCCATAGCAGAAAAAAACAGCACTCGTTTACAACAACTCATGTGGATGCTCAACGAACTAAGCTCCCCTTATGGTGACATAGAACAAAAACTAGCTGCATATTTTCTCCAAGCCTTATTCTCTCGAATGACCGAAGCCGGTACCCGAACCTTCCGAACCCTAGCTTCAGCATCAGAAAAAACTTGCTCATTTGAGTCAACACGAAAAACGGTTTTAAAATTCCAAGAAGTTAGTCCATGGACAACCTTCGGCCATGTCGCATGCAATGGCGCCATTTTAGAAGCCTTCGAAGGTGATTCCAAGTTGCACATAATTGATATTAGTAACACTTATTGCACTCAATGGCCAACGCTTTTTGAAGCGTTGGCCACTCGTGCTGATGACACTCCTCACCTCCGTTTAACTACGGTTGTAACCGCTGGTGGTTCTGTTCAAAAAGTTATGAAGGAAATTGGTGCTAGAATGGAAAAATTCGCTAGGCTTATGGGAGTTCCATTTAAATTCAACGTTATTCATCACTCCGGTGATCTTTCTGATTTGAATTTTTTGGATTTAGATATTAAAGAAGACGAAGCTTTAGCTGTTAATTGTGTTAATGCTTTGCATTCAGTAACAGTTGGTAATGGTAACGGTAATAACCGTCGCGAGGCGTTGATAGCTTCGTTGATCGCGTTGCGGCCTAGGATAGTAACAGTGGTTGAAGAGGAGGCTGATTTAAATTTTGGTAATGAGGGATATGAATTTGTGAATGGTTTTGAAGAGTGTTTAAGGTGGTTTAGGGTTTACTTTGAAGCATTAGAAGAGAGTTTTCCGAAGACGAGTAACGAGCGTTTGATGCTTGAAAGGGAAGCAGGTAGAGGGATAGTTGATTTGGTGGCATGTACTCCGGCGGAGTCGATCGAACGGAGAGAAACGGCAGTGAGGTGGTCACGGCGTTTGCATGGTGGAGGTTTTAATACGGTGGCGTTTAGTGAGGAAGTTTGTGATGATGTTAGGGCTTTGTTGAGGAGGTATAAGGAAGGGTGGTCGATGATACGGTGTAATGATGCCGGAATATTCTTGACGTGGAAGGAACAACCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1482 0.4271 MDTLFRLVSFQPHQQQQQQQEDQSLNSTTSRTTTSSSSRSSKQNYHQYYNPQEVEEECFNFFMDEEDLSSSSSKHYYPYNQPQTSNTITTNTPTPSLTPPPPTTDFTFELTGKWANNILLETARAIAEKNSTRLQQLMWMLNELSSPYGDIEQKLAAYFLQALFSRMTEAGTRTFRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEAFEGDSKLHIIDISNTYCTQWPTLFEALATRADDTPHLRLTTVVTAGGSVQKVMKEIGARMEKFARLMGVPFKFNVIHHSGDLSDLNFLDLDIKEDEALAVNCVNALHSVTVGNGNGNNRREALIASLIALRPRIVTVVEEEADLNFGNEGYEFVNGFEECLRWFRVYFEALEESFPKTSNERLMLEREAGRGIVDLVACTPAESIERRETAVRWSRRLHGGGFNTVAFSEEVCDDVRALLRRYKEGWSMIRCNDAGIFLTWKEQPVVWASAWRP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00638 493 ProSiteProfiles GRAS family profile. 106 492 IPR005202 -
Mepo5g00638 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 75 482 IPR005202 -
Mepo5g00638 493 Pfam GRAS domain family 117 492 IPR005202 -
Mepo5g00638 493 MobiDBLite consensus disorder prediction 1 45 - -
Mepo5g00638 493 MobiDBLite consensus disorder prediction 72 93 - -
Mepo5g00638 493 MobiDBLite consensus disorder prediction 72 98 - -
Mepo5g00638 493 MobiDBLite consensus disorder prediction 8 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00638 Mepo-Chr5 6009892 6011561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00638 1 493 GRAS Transcription Factor Family AT4G37650 59.444 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo5g00638 GRAS 1.1e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00638 - - gmx:100797072 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00638 5 6009892 6011561 Mepo5g00638 5 6009892 6011561 ECH
Mepo5g00638 5 6009892 6011561 Mepo1g01798 1 17846464 17848261 PCT