Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00627 ATGCCTATGTATCAGCCTTCTAAAAGGGATATGGTTGTTGGGTATGAGGGTGGTGGTGATGGTCAGATTCTAGATCTGGACACAGCTGTAAAAGATGGGGTTTTGGGTGGTGTTGATTGTGGTGGTATTGTAGGAACTGGTGTTGTTGGTGAGAAATTAGATCTGAGAAAAATGATTCAAGAGCTTGAGTTATGTGAAGTACCTAGTGTTTTCATTTGTCCAATTTCTCTTGAACCAATGCAAGACCCTGTTACTCTTTGCACTGGACAAACCTATGAGAGGAACAACATTCTCAAATGGTTTAACATGGGACACTTTACTTGTCCTACTACTATGCAAGAGCTTTGGGATGATTCCATCACTCCAAACACAACACTTTATAGGTTGATATATACTTGGTTTTCTCAGAAGTACTTGTTGATGAAGAAGAGGTCTGAAGATGTTCAAGGAAGAGCTTCTGAGCTTGTGGAGACACTCAAGAAGGTGAAGGGTCAAGCTAGAGTTCATGCTTTGAAGGAGCTTCATCAAGTTGTGGCTGTTCATGCTACTGCTCGTAAGTCTGTGATTGATGGAGGTGGTGTTTCTGTTTTATCTTCTTTACTTGGTCCTTTTACTTCACATGCTGTTGGTTCTGAAGTTATTGGTATTCTTGTCAGTTTGACACTTGATTCTGAATCTAAGAAGAATCTTATGCAACCTGCTAAGATTTCTTTGATGGTTGATATCTTGAATGAGGGTTCAATTGAGACTAAAATCAATTGCACGCGGTTGATTGAAACGTTAATTGAGGAGAAAGATTTTCGTTCCGAGATTATCTCCAGCCATAGTTTATTGGTTGGATTGATGAGGCTTGTTAAGGATAAGAGACATAGCAATGGAATCTGTCCTGGATTAAGCCTTCTCAGAACAGTGTGCTTCTATAAGGAAGTTAAGATTTTGTTAGTTAGCATTGGTGCTGTTTCTCAATTAGTTGAATTGTTGTCTGGTATGGACCATGATTGTTTGGAATTAGCCCTTTGTGTTTTGGATTCGTTATCGTCAATACCCGAAGGCAGGGTAGCTTTGAAGGAATGTGTTAACACCATACCTATCATGGTGAGACTTTTGATGAGGATATCAGAAAGCTGTACTCAGTATGCATTGTCAATTTTGTGGTCTGTTTGCAAGCTCGCGCCAGAGGAGTGTTCGTCGATTGCCGTTGATGCAGGACTTGCCGCTAAGCTCCTTCTTGTGATTCAAAGTGGTTGCAATCCAATATTGAAACAACAATCTGCTGAGCTTTTGAAACTATGTAGTTTGAATTATTCAGATACCATCTTCATTTCCAAGTGCAAGCTTACAAGAACCATCCAATGA 1356 0.3997 MPMYQPSKRDMVVGYEGGGDGQILDLDTAVKDGVLGGVDCGGIVGTGVVGEKLDLRKMIQELELCEVPSVFICPISLEPMQDPVTLCTGQTYERNNILKWFNMGHFTCPTTMQELWDDSITPNTTLYRLIYTWFSQKYLLMKKRSEDVQGRASELVETLKKVKGQARVHALKELHQVVAVHATARKSVIDGGGVSVLSSLLGPFTSHAVGSEVIGILVSLTLDSESKKNLMQPAKISLMVDILNEGSIETKINCTRLIETLIEEKDFRSEIISSHSLLVGLMRLVKDKRHSNGICPGLSLLRTVCFYKEVKILLVSIGAVSQLVELLSGMDHDCLELALCVLDSLSSIPEGRVALKECVNTIPIMVRLLMRISESCTQYALSILWSVCKLAPEECSSIAVDAGLAAKLLLVIQSGCNPILKQQSAELLKLCSLNYSDTIFISKCKLTRTIQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00627 451 PANTHER WDSAM1 PROTEIN 60 437 IPR045185 GO:0061630
Mepo5g00627 451 SMART Ubox_2 70 133 IPR003613 GO:0004842|GO:0016567
Mepo5g00627 451 SUPERFAMILY ARM repeat 237 437 IPR016024 -
Mepo5g00627 451 CDD RING-Ubox_PUB 68 118 IPR045210 -
Mepo5g00627 451 Gene3D - 140 445 IPR011989 -
Mepo5g00627 451 ProSiteProfiles U-box domain profile. 66 140 IPR003613 GO:0004842|GO:0016567
Mepo5g00627 451 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 139 IPR013083 -
Mepo5g00627 451 SUPERFAMILY RING/U-box 62 137 - -
Mepo5g00627 451 Pfam U-box domain 67 137 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00627 Mepo-Chr5 5870575 5873219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00627 1 451 U-box Gene Family AT3G49810 74.279 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00627 - - gmx:100779827 777.704