Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00618 ATGCTCTCTTCTCTCTATGCTTCCGATTTCACGGCGTTAGACGAAAGTTTAACGCCGTGGGATTTTTCTAACATTCTGTCACCCTTCAATCCCACCAGCCCTAAGCTCACTTCAAGCTCCGGTTCAGGCGAACCAAACGAAAACCCGGTCATGGATGGCTCGAACCGGAATATGGAGGACCGAAAGCGGAGGAGAATGATATCAAACCGGGAATCAGCAAGAAGATCACGTATGAGAAAACAAAGACATCTAGAGAATTTACGGAACCATGTGAACCGGTTCAGAGTTGAAAACCGGGAATTGAACAACGGGTTGCAGTTTTTACTGTATCAATGCAATCGTCTACGAACCGAAAATGAGTGGCTCCGGTTGGAACGAACCATGCTGGGTCAAAAGTTGTCAAACATAAGTCAAAATATGGTTTTTCAACCTTTCTCATCTGCATGGCCATGCAATATTGTCACAGCTGAATAA 474 0.4494 MLSSLYASDFTALDESLTPWDFSNILSPFNPTSPKLTSSSGSGEPNENPVMDGSNRNMEDRKRRRMISNRESARRSRMRKQRHLENLRNHVNRFRVENRELNNGLQFLLYQCNRLRTENEWLRLERTMLGQKLSNISQNMVFQPFSSAWPCNIVTAE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00618 157 CDD bZIP_plant_GBF1 62 113 IPR045314 GO:0003700|GO:0006355
Mepo5g00618 157 FunFam BZIP transcription factor 59 110 - -
Mepo5g00618 157 Gene3D - 60 136 - -
Mepo5g00618 157 MobiDBLite consensus disorder prediction 33 84 - -
Mepo5g00618 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 29 142 - -
Mepo5g00618 157 Coils Coil 84 104 - -
Mepo5g00618 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 59 122 IPR004827 GO:0003700|GO:0006355
Mepo5g00618 157 SMART brlzneu 57 121 IPR004827 GO:0003700|GO:0006355
Mepo5g00618 157 MobiDBLite consensus disorder prediction 33 53 - -
Mepo5g00618 157 SUPERFAMILY Leucine zipper domain 61 112 IPR046347 GO:0003700|GO:0006355
Mepo5g00618 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 64 79 IPR004827 GO:0003700|GO:0006355
Mepo5g00618 157 Pfam bZIP transcription factor 59 120 IPR004827 GO:0003700|GO:0006355
Mepo5g00618 157 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00618 Mepo-Chr5 5815265 5816055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00618 5 142 bZIP Transcription Factor Family AT3G49760 39.568 1.53e-30 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo5g00618 bZIP_1 1.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00618 - - gmx:102661188 197.208