Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00610 ATGGGTCTTAATGATCAAGATTCTCTTCACCTTGTTCTAGGTTTATCTTTGAATACCTCTACTACTCCAAAGGAAATAACTACCACCACCCCCATGAATCCCTACTCCAGCTCCAACGAGCCATCCTTAACGTTAGGACTCTCTGGTGAGAGTTATAACCGTACAAGTTACAAACAAGCTACCAAAGGTTATGGTGAGGAACTTTGTAGACAAACTTCTTCACCTCATAGCGTTGTTAACTCATCTTTCTCAACTGGGAGAGTGCTGCAAGTGAAGAGGGAGAGAGATGAAGAAGAAGAAGTAGAAGAAGAGAGGGTTTCTTCAAGAGTTAGTGATGAAGATGAAGATGCTACAAATGCTAGAAAGAAACTAAGGCTTACCAAAGAACAATCACTATTGCTTGAAGAAAGCTTCAAACTACATAGCACTCTCAATCCTAAACAAAAACAAGCTTTAGCGAGACAGTTGAATCTAAGGCCACGACAAGTTGAAGTATGGTTCCAGAATCGGAGAGCCAGAACAAAGCTGAAACAAACAGAGGTGGATTGCGAGTTCTTGAAGAAATGTTGTGAAACATTAACAGACGAAAACAGGAGGCTCAAAAAGGAGTTGCAAGAGTTGAAGTCATTGAAAGTAGCACAACCTTTGTACATGCCTATGCCTGCAGCCACCCTTTCCATCTGCCCCTCTTGCGAAAGACTCGGCCGCGTCGCCGACGGTGGTGGTGGTTCCAATAAGATCACTGCCTTCACTATGGCTCCAAATACTCATTTCTACAATCCTTTCAACAATCCTTCTGCAGCATGTTAA 810 0.4272 MGLNDQDSLHLVLGLSLNTSTTPKEITTTTPMNPYSSSNEPSLTLGLSGESYNRTSYKQATKGYGEELCRQTSSPHSVVNSSFSTGRVLQVKRERDEEEEVEEERVSSRVSDEDEDATNARKKLRLTKEQSLLLEESFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKSLKVAQPLYMPMPAATLSICPSCERLGRVADGGGGSNKITAFTMAPNTHFYNPFNNPSAAC 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00610 269 SMART halz 177 220 IPR003106 GO:0006355|GO:0043565
Mepo5g00610 269 ProSiteProfiles 'Homeobox' domain profile. 117 177 IPR001356 GO:0003677
Mepo5g00610 269 MobiDBLite consensus disorder prediction 88 121 - -
Mepo5g00610 269 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 11 240 - -
Mepo5g00610 269 Coils Coil 183 213 - -
Mepo5g00610 269 CDD homeodomain 121 178 IPR001356 GO:0003677
Mepo5g00610 269 Pfam Homeodomain 121 175 IPR001356 GO:0003677
Mepo5g00610 269 MobiDBLite consensus disorder prediction 89 121 - -
Mepo5g00610 269 SUPERFAMILY Homeodomain-like 114 178 IPR009057 -
Mepo5g00610 269 ProSitePatterns 'Homeobox' domain signature. 152 175 IPR017970 GO:0000981|GO:0006355
Mepo5g00610 269 Pfam Homeobox associated leucine zipper 177 210 IPR003106 GO:0006355|GO:0043565
Mepo5g00610 269 SMART HOX_1 119 181 IPR001356 GO:0003677
Mepo5g00610 269 FunFam Homeobox-leucine zipper protein 18 106 182 - -
Mepo5g00610 269 Gene3D - 127 173 - -
Mepo5g00610 269 MobiDBLite consensus disorder prediction 21 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00610 Mepo-Chr5 5659658 5661840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00610 1 269 Homeobox Transcription Factor Family AT4G37790 59.862 1.14e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo5g00610 Homeodomain 6.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00610 K09338 - gmx:100784129 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00610 5 5659658 5661840 Mepo1g01758 1 17472295 17473999 PCT