Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00597 ATGCGTTTCCTTCTTCTCCTTTTCTTTCTCTCTCATTTCCACTACCACCATGTTCTCTCTGCATCTGCACCTATCTCAGAATACCGTGCACTTCTCTCTTTCCGTCAATCAATTACCGATTCTACCCCTCCATCACTCTCTTCATGGAACATTAACACCACACACTGCACGTGGTTCGGTGTAACATGCAACACGCGCCGCCACGTCACCGCCGTTAACCTCACCGGACTTGACCTCTCCGGCACACTCTCCGATGAACTCTCTCATCTCCCATTTCTCACCAACCTCTCATTAGCAGACAATAAATTCTCCGGCCAAATCCCGCCGTCTCTCTCCGCCGTCACTAACCTCCGTCTTCTCAACCTCTCCAACAATGTCTTCAACGGAACTTTCCCTTCCGAACTCTCTCTTCTCAAAACCCTTGAAGTTCTTGATCTCTACAACAACAACATGACCGGTACTCTTCCCTTAGCGGTAACGGAGTTACCAAATCTCCGTCATCTTCATCTCGGAGGTAACTACTTCACCGGCCAGATCCCGCCGGACTACGGTTCATGGCAGCATTTAGAGTATTTAGCAGTTTCCGGTAACGAACTCGACGGAACAATTCCACCAGAGATCGGAAACTTAACAAGTCTCCGGGAGCTTTACATCGGATACTTCAACACATACACCGGTGGCATTCCGCCGCAAATCGGAAACTTAACAGAACTCATCCGTCTCGACGCGGCGTACTGTGGTTTATCCGGTGAGATACCACATGAAATCGGTAAACTTCAAAACCTAGATACACTGTTTCTTCAGGTGAATGCACTTTCAGGCTCTTTAACTTGGGAGCTTGGAAATTTGAAGAGCTTAAAATCAATGGATTTGTCTAATAACATGTTAACCGGTGAGATTCCGACGAGTTTCGGTGAACTGAAGAATTTAACACTTTTGAATTTGTTCAGAAACAAGCTTCATGGTGCTATACCGGAGTTTATTGGTGATATGCCGGCGTTGGAGGTTATTCAGTTATGGGAGAATAACTTCACCGGTAATATTCCGATGAGTTTGGGAACAAATGGAAAATTGTCTCTTTTAGACATTTCATCAAACAAGTTAACTGGAACACTTCCACCTTATTTGTGTTCTGGGAATAAGCTTCAAACTTTGATAACTCTTGGGAATTTTTTGTTTGGTCCAATTCCTGAATCTCTTGGTGGTTGTGAATCATTGACTCGGATTCGAATGGGCGATAATTTTTTGAATGGTTCAATTCCTAAGGGTTTGTTTGGATTACCGAAATTGAGTCAGGTTGAACTTCAAGATAATTATTTATCTGGAAATTTTCCTGAGACTCATTCTGTTTCTGTTAATCTTGGTCAGATTACTTTGTCGAATAATCAACTTTCAGGTCCTTTGCCTCCTTCTATTGGGAATTTTTCCGGCGTGCAGAAGCTTCTGCTTGATGGTAACATGTTTGAGGATAAGATTCCATCTCAGATTGGAAGGTTGCAACAGCTTTCTAAGATTGATTTTAGTCATAACAGGTTTTCGGGTCCGATTGCACCTGAGATTAGCAAATGCAAGCTGTTAACTTTTGTTGATCTTAGTCGAAATGAGTTATCTGGGGTTATCCCTAATGAGATAACTCATATGAAGATATTGAATTACTTCAATATTTCTAGAAATCATTTGGTTGGTAGTATTCCGGGTTCTATAGCGTCGATGCAGAGTTTAACTTCTGTTGATTTTTCGTATAATAATTTATCTGGTTTGGTTCCTGGTACTGGTCAATTTAGTTACTTTAACTACACGTCTTTCTTGGGAAACCCTGATCTCTGTGGACCTTATTTGGGTGCTTGTAAAGATGGTGTTCTTGATGGGCCTAACCAACCTCATCATGTTAAGGGTCATCTTTCTTCTACCGTGAAGCTGTTGCTTGTTATTGGGTTGCTTGCATGTTCGATTGTGTTTGCTATTGCAGCAATTATCAAGGCTCGGTCTTTGAAGAAGGCTAGTGAGGCTCGTGCATGGAAATTGACTTCATTCCAACGTTTGGAATTCACTGCGGACGATGTTTTGGATTCCTTAAAGGAGGATAACATCATAGGAAAAGGAGGTGCTGGCATTGTCTACAAAGGGGCAATGCCGAATGGGGAACTTGTTGCTGTTAAAAGGCTTCCGGTTATGAGCAGAGGCTCTTCTCATGATCATGGATTCAATGCTGAGATTCAGACGCTGGGGAGAATTCGACATAGGCACATTGTTAGGTTGTTGGGTTTCTGTTCAAACCATGAGACAAATCTTTTGGTTTATGAGTACATGCCTAATGGAAGTTTAGGCGAAGTTCTCCATGGAAAGAAAGGTGGTCATTTGTATTGGGATACAAGGTATAAAATTGCTGTGGAGGCTGCAAAGGGACTTTGCTATCTACACCATGATTGTTCCCCGCTTATTGTTCATCGAGATGTGAAATCAAACAACATCCTTCTTGATTCTAATTATGAAGCCCATGTTGCTGATTTTGGACTTGCCAAGTTCTTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATTGCTGGTTCATATGGATACATAGCTCCAGAGTATGCCTATACATTGAAAGTTGATGAGAAAAGCGATGTATACAGCTTCGGTGTTGTTCTTTTAGAGCTTGTAACTGGAAGGAAACCAGTAGGAGAATTTGGCGACGGTGTGGACATTGTGCAATGGGTGAGAAAAATGACTGACTCCAACAAGGAAGGAGTTCTAAAAGTTCTTGATCCAAGACTATCCTCAGTTCCTCTCCATGAGGTCATGCATGTTTTCTATGTAGCCATTCTGTGTGTTGAAGAACAAGCAGTAGAAAGGCCAACTATGCGCGAAGTTGTTCAGATTCTGACTGAGCTTCCCAAGTCACCTGAGTCTAAACTAGGAGACTCAACAATTACGGAATCCTCTTTGTCATCATCAAATGCTTTAGAATCTCCAACTGCAGCCTCTAAGGATCATCAATCACCACCACCGGATCTCCTAAGCATTTGA 3033 0.4243 MRFLLLLFFLSHFHYHHVLSASAPISEYRALLSFRQSITDSTPPSLSSWNINTTHCTWFGVTCNTRRHVTAVNLTGLDLSGTLSDELSHLPFLTNLSLADNKFSGQIPPSLSAVTNLRLLNLSNNVFNGTFPSELSLLKTLEVLDLYNNNMTGTLPLAVTELPNLRHLHLGGNYFTGQIPPDYGSWQHLEYLAVSGNELDGTIPPEIGNLTSLRELYIGYFNTYTGGIPPQIGNLTELIRLDAAYCGLSGEIPHEIGKLQNLDTLFLQVNALSGSLTWELGNLKSLKSMDLSNNMLTGEIPTSFGELKNLTLLNLFRNKLHGAIPEFIGDMPALEVIQLWENNFTGNIPMSLGTNGKLSLLDISSNKLTGTLPPYLCSGNKLQTLITLGNFLFGPIPESLGGCESLTRIRMGDNFLNGSIPKGLFGLPKLSQVELQDNYLSGNFPETHSVSVNLGQITLSNNQLSGPLPPSIGNFSGVQKLLLDGNMFEDKIPSQIGRLQQLSKIDFSHNRFSGPIAPEISKCKLLTFVDLSRNELSGVIPNEITHMKILNYFNISRNHLVGSIPGSIASMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVLDGPNQPHHVKGHLSSTVKLLLVIGLLACSIVFAIAAIIKARSLKKASEARAWKLTSFQRLEFTADDVLDSLKEDNIIGKGGAGIVYKGAMPNGELVAVKRLPVMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLYWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLSSVPLHEVMHVFYVAILCVEEQAVERPTMREVVQILTELPKSPESKLGDSTITESSLSSSNALESPTAASKDHQSPPPDLLSI 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00597 1010 SMART serkin_6 692 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00597 1010 Gene3D Ribonuclease Inhibitor 181 277 IPR032675 -
Mepo5g00597 1010 SMART LRR_typ_2 356 379 IPR003591 -
Mepo5g00597 1010 SMART LRR_typ_2 571 594 IPR003591 -
Mepo5g00597 1010 SMART LRR_typ_2 162 186 IPR003591 -
Mepo5g00597 1010 SMART LRR_typ_2 307 331 IPR003591 -
Mepo5g00597 1010 SMART LRR_typ_2 283 306 IPR003591 -
Mepo5g00597 1010 MobiDBLite consensus disorder prediction 969 1010 - -
Mepo5g00597 1010 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Mepo5g00597 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 84 327 - -
Mepo5g00597 1010 Gene3D Transferase(Phosphotransferase) domain 1 770 985 - -
Mepo5g00597 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 335 620 - -
Mepo5g00597 1010 Gene3D Ribonuclease Inhibitor 357 619 IPR032675 -
Mepo5g00597 1010 Gene3D Ribonuclease Inhibitor 278 356 IPR032675 -
Mepo5g00597 1010 Pfam Protein kinase domain 694 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00597 1010 SUPERFAMILY L domain-like 300 616 - -
Mepo5g00597 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Mepo5g00597 1010 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 231 965 - -
Mepo5g00597 1010 Pfam Leucine Rich Repeat 285 307 IPR001611 GO:0005515
Mepo5g00597 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 980 - -
Mepo5g00597 1010 Gene3D Phosphorylase Kinase; domain 1 657 769 - -
Mepo5g00597 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 661 769 - -
Mepo5g00597 1010 ProSiteProfiles Protein kinase domain profile. 692 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00597 1010 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Mepo5g00597 1010 SUPERFAMILY Protein kinase-like (PK-like) 687 963 IPR011009 -
Mepo5g00597 1010 SUPERFAMILY RNI-like 72 393 - -
Mepo5g00597 1010 MobiDBLite consensus disorder prediction 971 999 - -
Mepo5g00597 1010 Pfam Leucine Rich repeats (2 copies) 140 179 IPR025875 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00597 Mepo-Chr5 5559979 5564176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00597 14 1010 Receptor kinase-like Gene Family AT5G65700 79.741 0.0 1599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo5g00597 Pkinase 9.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00597 - - ccaj:109800149 1728.38