Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00588 ATGTTTGGTGAAGAAGAGTTTATTTCACATGACATAGCTAGTGTTTTTCAACAAGAGGAAAATTGGCAACAACAACCTTTGTCACTTTTTGAAAGCTATTCTTCTTATCCTTTGGAAACAAATTTGGAAAGAGCCAACAAGACTTTGGAAACAAATTTGGAAAAAACCAACAAGAAGTTGAAAACGAACACCACTTTGCAAGAAGTTGGTCCATTGTCACAAACACAACTACCTCAAAATAAAAAAGAGTCATTGCAAAAACAAAACGTTGTTGAAACTAAAAATACACAAGGACAAGGGACTAAGAGGTCTGTTTGTCATGATCATCAAGACCGTATCATGGCGGAGAGAAAGAGAAGAGAGAAAGTCAGTCAGTGCTTAATTACTCTAGCTGCTCTTATTCCTGTTGCTCTCAGATCTCATTGTCTCATTCATGGATTCTTCAAGACGGACAAGACTTCAGTCATAGGAGATGCTATCAAGCATGTGAAAGAGCTCCAAGAACGTTTGAGGGTATTAGAAGAACAAAATAAGAATAGTTCTATTGAATCTGTAGTGACGCTTAACAAATTGCAGCTAAGTTATGAGTCATGGAGTAATTATGGTTCTAAGGCTGCTAGTTCTAGTAATGAAGATCTCCTCCATGTGGATGCCAAAATTTTGGACAAAAACGTGCTCATAAGGATCCAGTGCCAAAAGCAAAAGAGTTTTTTGCTTAATAAATTGGTTGAGATTCAAAAGCTTCATCTCTTTGTTGTTAATAGCAGCGTCCTAGCTATTGGGGATTCTATCGTTGACATAACAATCATTGCTCGGGTAAAGAAAAATATCAACTTTTTAAATATTAATTTTTGA 855 0.3602 MFGEEEFISHDIASVFQQEENWQQQPLSLFESYSSYPLETNLERANKTLETNLEKTNKKLKTNTTLQEVGPLSQTQLPQNKKESLQKQNVVETKNTQGQGTKRSVCHDHQDRIMAERKRREKVSQCLITLAALIPVALRSHCLIHGFFKTDKTSVIGDAIKHVKELQERLRVLEEQNKNSSIESVVTLNKLQLSYESWSNYGSKAASSSNEDLLHVDAKILDKNVLIRIQCQKQKSFLLNKLVEIQKLHLFVVNSSVLAIGDSIVDITIIARVKKNINFLNINF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00588 284 Gene3D - 115 197 IPR036638 GO:0046983
Mepo5g00588 284 MobiDBLite consensus disorder prediction 56 106 - -
Mepo5g00588 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 166 IPR011598 GO:0046983
Mepo5g00588 284 MobiDBLite consensus disorder prediction 58 103 - -
Mepo5g00588 284 Pfam Helix-loop-helix DNA-binding domain 113 167 IPR011598 GO:0046983
Mepo5g00588 284 Coils Coil 39 59 - -
Mepo5g00588 284 Coils Coil 156 183 - -
Mepo5g00588 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 112 179 IPR036638 GO:0046983
Mepo5g00588 284 SMART finulus 113 172 IPR011598 GO:0046983
Mepo5g00588 284 PANTHER BHLH TRANSCRIPTION FACTOR 57 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00588 Mepo-Chr5 5332631 5334642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00588 99 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.021 2.19e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00588 - - tpra:123910022 216.853