Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00587 ATGGAAAAAATAAACTCTTCTTCAAACTCATCATCAACTAGCTGGTTATCTGATCTGCTATTGGAAGAAATGGAAATAGAGGGTTGTGATTTGTTTCAACAATGTGAACAAAACTTGTTTGGTGAAGAAGAGTTTCTTTCACATGACATAGCAAGTATTTTTCAACAAGAGGAAAATTTCCCACATCAACCTTTGTTATCTTCTGAAAGCTATTCTTCTTGTTATCCTTTAGAAAAGAATTTGGAAAGACCCAACAAAAAATTGAAAAAAAACACTACTTTCCTAGCTGTTTCTTCCCCTTCTTCTACCACTTCTCAGATTCTGTCTTTTGATTGTACCTTAAATACAAAAAAGAACAAGGTTGTTCCATTGTCACAAACACAATTACCTCAAAATAGAAAAGGGTCATTGCAAAAACAAAACATTGTTGAAACTACAAAGTCACAAGGACAAGGGACCAAGAGGTCATTGGCTCATAATCAGGACCATATCATAGCAGAGAGAAAGAGAAGAGAGAAACTCAGTCAGTGTTTAATTGCTCTAGCTGCTCTTATTCCTGGCTTGAAGAAGATGGACAAGGCTTCAGTCCTAGGAGATGCAATCAAGTACGTGAAAGAGCTCCAAGAACGTTTGAGGGTATTAGAGGAACAAAACAAAAATAGTAATGTTCAGTCTGTGGTGACGGTTGATGAACCACAACTAAGTTACGACTCATCAAACAATGATGACTCTGAAGCTGCTAGTAGTAATAATGAAACTCTCCCACATGTAGAAGCCAAAGTTTTGGACAAGGACGTGCTCATAAGGATCCACTGCCAAAAGCAAAGGGGACTTTTGCTCAAAATATTGGTCGAGATTCAAAAGCTTCATCTCTTGATTGTTAACAACAGTGTCCTACCTTTTGGGGATTCTATCCTTGATATAACCATCGTTGCTCAGGTGATTCCTGAGAAGTATATTTTAGGAAGGTGGACAAGAGATGCCCGTTGTGGTATTGTGCAAGATTTTAGAGGAAAAGAGGTTGAAAGTGATCCTAAGTTGGCTAGAAATCGAATGTTTAGACAAGTTGTCTCTAAATTCATTAGAACGGCAACTGAAGCATCATATAGTGAGGAATCCCTCAAGTCTCTTGATAATGGTGAAGATGTCTTGTTCAAGAATGTAATAGAGGATCGCGCACAAGCTATAAAAAATGGCGGTAATAACAATGATCATCCGACAGTTGTGAGTTCTGATGTTATGCAACCAAAGGGATTCAGGACACGACCCGGCTCAAAGAGGAGAACTAAGCGACATAAAAGTTTTCTTGAGCAGCAGTCTAAGAAAAAAACTCCTGCACCTAAACGTGCTACACCTCAAGGAAGAAGTTCACAGGATATGGTCGATGGAGTTTCTTGTTCCGCGCCTCCAACTTACGAGTCCCTGCTAGCACGTGAGGATCAATTCAGTTACACAACCATGTTGATGGCACCCTTTGATGATACAAATTTTGGAGCATTACTTTGA 1506 0.3898 MEKINSSSNSSSTSWLSDLLLEEMEIEGCDLFQQCEQNLFGEEEFLSHDIASIFQQEENFPHQPLLSSESYSSCYPLEKNLERPNKKLKKNTTFLAVSSPSSTTSQILSFDCTLNTKKNKVVPLSQTQLPQNRKGSLQKQNIVETTKSQGQGTKRSLAHNQDHIIAERKRREKLSQCLIALAALIPGLKKMDKASVLGDAIKYVKELQERLRVLEEQNKNSNVQSVVTVDEPQLSYDSSNNDDSEAASSNNETLPHVEAKVLDKDVLIRIHCQKQRGLLLKILVEIQKLHLLIVNNSVLPFGDSILDITIVAQVIPEKYILGRWTRDARCGIVQDFRGKEVESDPKLARNRMFRQVVSKFIRTATEASYSEESLKSLDNGEDVLFKNVIEDRAQAIKNGGNNNDHPTVVSSDVMQPKGFRTRPGSKRRTKRHKSFLEQQSKKKTPAPKRATPQGRSSQDMVDGVSCSAPPTYESLLAREDQFSYTTMLMAPFDDTNFGALL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00587 501 Coils Coil 197 224 - -
Mepo5g00587 501 MobiDBLite consensus disorder prediction 421 437 - -
Mepo5g00587 501 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Mepo5g00587 501 Pfam Helix-loop-helix DNA-binding domain 162 208 IPR011598 GO:0046983
Mepo5g00587 501 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 221 IPR036638 GO:0046983
Mepo5g00587 501 MobiDBLite consensus disorder prediction 396 466 - -
Mepo5g00587 501 Gene3D - 150 224 IPR036638 GO:0046983
Mepo5g00587 501 PANTHER BHLH TRANSCRIPTION FACTOR 49 314 - -
Mepo5g00587 501 SMART finulus 164 213 IPR011598 GO:0046983
Mepo5g00587 501 MobiDBLite consensus disorder prediction 396 410 - -
Mepo5g00587 501 MobiDBLite consensus disorder prediction 233 252 - -
Mepo5g00587 501 MobiDBLite consensus disorder prediction 450 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00587 Mepo-Chr5 5302739 5316783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00587 12 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.222 1.29e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo5g00587 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00587 - - tpra:123910022 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00587 5 5302739 5316783 Mepo1g01746 1 17320715 17323752 PCT