Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00542 ATGAAGTGTTTCTTCTTCAAACAAAAATCTAAATCAGACCCAGATTTAAACCGTAAAAAGAAGAAAAATCATGCAAAAAAATCCACCAGTGCACATTCATCACCAAGGAGCATAAAAGAATTGTACAAAGAGAAAGAACACAATTTCAGAGTTTTTACTCTTCAAGAGCTTGTAGATGCAACAAATGGTTTTAATAAAGTGTTGAAGATTGGAGAAGGAGGTTTTGGGAAAGTATATAGAGGAACAATTACTCCAGAAAATGGAATAGGTAACCCAATTGTGGTTGCAATAAAAAAACTCAACACTCGTGGATTTCAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTAGGAATTGTGAATCACCCGAATTTGGTTAAGCTTTTGGGATATTGTTCTGTGGATGGTGAAAGTATCCAACGGTTGTTAGTCTATGAGTTTATGCCTAATAGAAGTTTAGAAGATCATCTTTTCAGTCGTTCTTTACCTACTTTGCCTTGGAAAATAAGATTGCAAATTATGCTTGGTGCTGCTCAAGGATTACAGTATTTACATGAGGGTTTGGAGATTCAGGTGATCTACAGAGATTTCAAATCTTCAAATGTGCTGCTGGACAAGAAATTCCACCCCAAGCTCTCAGATTTTGGTCTTGCTAGGGAGGGCCCAACAGGTGACCAAACTCATGTCTCTACTGCGGTAGTTGGAACAAGGGGCTATGCAGCACCAGAGTATATTGAAACAGGTCATTTAAAATCAAAGAGTGACATTTGGAGTTTTGGTGTGGTACTATATGAGATTCTGACAGGAAGAAGAACCATTGAAAGAACCCTTCCAAAAGTGGAACAAAAGCTTATAGAATGGGTTAAAAACTACCCTGCTGACACTAGCAGATTCAGCTTGATAATAGACCCTAGACTCACGAAGCAATATTCTCTTGATGCAGCTAGGAAAATTGCTAAGTTGGCAGATAATTGCTTGAAGAAGAATGCTGAAGATAGGCCATCAATGAGTCAGATAGTAGAAAGTTTGAAACAAGCTTTGCAATGTTCATAA 1056 0.3778 MKCFFFKQKSKSDPDLNRKKKKNHAKKSTSAHSSPRSIKELYKEKEHNFRVFTLQELVDATNGFNKVLKIGEGGFGKVYRGTITPENGIGNPIVVAIKKLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGESIQRLLVYEFMPNRSLEDHLFSRSLPTLPWKIRLQIMLGAAQGLQYLHEGLEIQVIYRDFKSSNVLLDKKFHPKLSDFGLAREGPTGDQTHVSTAVVGTRGYAAPEYIETGHLKSKSDIWSFGVVLYEILTGRRTIERTLPKVEQKLIEWVKNYPADTSRFSLIIDPRLTKQYSLDAARKIAKLADNCLKKNAEDRPSMSQIVESLKQALQCS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00542 351 SUPERFAMILY Protein kinase-like (PK-like) 46 344 IPR011009 -
Mepo5g00542 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Mepo5g00542 351 ProSiteProfiles Protein kinase domain profile. 64 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00542 351 PIRSF ILK 18 351 - -
Mepo5g00542 351 MobiDBLite consensus disorder prediction 7 37 - -
Mepo5g00542 351 Pfam Protein kinase domain 65 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00542 351 ProSitePatterns Protein kinases ATP-binding region signature. 70 99 IPR017441 GO:0005524
Mepo5g00542 351 Gene3D Phosphorylase Kinase; domain 1 43 148 - -
Mepo5g00542 351 Gene3D Transferase(Phosphotransferase) domain 1 149 350 - -
Mepo5g00542 351 CDD STKc_IRAK 70 346 - -
Mepo5g00542 351 PANTHER OS01G0588500 PROTEIN-RELATED 26 348 - -
Mepo5g00542 351 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 149 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00542 Mepo-Chr5 4729854 4732172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00542 3 344 Glycoside Hydrolase AT3G07070 42.978 7.88e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo5g00542 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00542 - - gmx:100305403 570.852