Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00538 ATGGAGGAGGAACGGTACGAGATATTGAAGGACCTTGGTTCTGGAAACTTTGGAGTGGCTAGGTTGGCTAAAGACAAGAAGACAGGAGAACTTGTTGCTATCAAATACATTGAAAGAGGATATAAGATTGATGAGAATGTTCCAAGGGAGATAGTTAACCATCGATCTTTAAGGCATCCAAATATTATCAGGTTCAAAGAGGTATTTGTGACACCTACTCATTTAGCTATTGTCCTGGAGTATGCTGCTGGTGGTGAACTTTTTGACAGGATAGCCTCTGCTGGTCGACTCAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAACTAATATCTGGAGTTAGCTACTGTCATTCCATGGAAATTTGTCATAGAGATCTGAAATTGGAGAACACTTTATTGGATGGAAGTCCAGCTCCTCGAGTTAAAATTTGTGACTTTGGTTTCTCCAAGTCGTCTTTACTCCACTCTCAGCCCAAATCAACAGTTGGAACTCCTGCATATGTTGCACCAGAGGTTTTGTCTAGAAAAGAGTATGATGGAAAGGTATTGAAAAATTTGCATATTATTTATATCAAGCCACGTATCAATGTATTTGGAGCATGGTTAAATGCTAGTCGGATTTAG 624 0.3974 MEEERYEILKDLGSGNFGVARLAKDKKTGELVAIKYIERGYKIDENVPREIVNHRSLRHPNIIRFKEVFVTPTHLAIVLEYAAGGELFDRIASAGRLSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPAPRVKICDFGFSKSSLLHSQPKSTVGTPAYVAPEVLSRKEYDGKVLKNLHIIYIKPRINVFGAWLNASRI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00538 207 ProSiteProfiles Protein kinase domain profile. 6 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00538 207 PANTHER SERINE/THREONINE KINASE 4 181 - -
Mepo5g00538 207 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Mepo5g00538 207 FunFam Serine/threonine-protein kinase SRK2E 1 81 - -
Mepo5g00538 207 Pfam Protein kinase domain 6 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00538 207 SMART serkin_6 6 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00538 207 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Mepo5g00538 207 FunFam Maternal embryonic leucine zipper kinase 2 191 - -
Mepo5g00538 207 Gene3D Transferase(Phosphotransferase) domain 1 82 183 - -
Mepo5g00538 207 SUPERFAMILY Protein kinase-like (PK-like) 4 181 IPR011009 -
Mepo5g00538 207 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00538 Mepo-Chr5 4685446 4687949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00538 5 180 CBL-interacting serine-threonine protein kinases AT2G26980 44.920 1.14e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mepo5g00538 Pkinase 1.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00538 K14498 - gmx:547790 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00538 5 4685446 4687949 Mepo1g01681 1 16603231 16606028 PCT