Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00530 ATGAATTCGGAGCCATCAATGTTGGTTTGTGATGAACATTCTGAAGAAGAATTAGGGAAGCCAGTGATGGTAAATGGAGACTCAACTGTTGTTGATCCGCCTAAGTTTAAGCGTCGGAAAGTTTCTGCTGTTCGTGATTTTCCGGAAGAATGTGGACCGTTTGGTTCTGCTGATGGTACGAGTGTTGAGGTTAAGAGTGGTGAAGATTTAGGTGGTGGTGATTCGGGTGAAGCTGATAGTCCCAACGATGAAAAGGATCCTCAAAATTTTGAGTTCAATGAAGATTTGTTTGTTGCAGACACTGTTGAACAAACAAGTGACTGTAGTTTGAAGGAGGATCCTGTGGTCTTATCTGATCAAGTGGATGTGGGTAGTTTTGCCAACGATGAACCTGCAAAAGTGGAATTGGTGGGCGTAGAAGCTATGGATATTAGTTTTGAAACTGAAGACTGTAGCTTGAAAAAGGAAGATCCTGCGGTCTCATCTCATCAAGTGGATGGGGATATTTTGGTTAACGATGAAGCTTCAAAAGTGGAATTGGTGGGCATGGAAGCTGTGGATATGCAATTGGAAACTGAAGACTGTAGCTTGAGAAAGGAAGATCCCATGGTCTCATCTCATCAATTGGATGTGCCTATTTTGGATAATAACGAAGATACAAAACTGACATTGGTGGGCATGGAGACTTTGGATGCGGAATTGGCAACTGAAAGCTGTAGTTTGAAGAACGAAAATGCAGCGATCTTATCTTATCAAATTGATGAGTCTACTTTGGCAAATGACGGACCTGCAGAACTGGCATTGGTCGGTATGGAAACTTCAGATATGGAATTTACAACAGAAGGCTCCGTAAAACAAGATTTATCTTATATATCAGAGGCACCGGCTCCAGTTGGCGAGGTAGCTATGTCTGATAACTCAAAATCCTCGTTGTCCAATATCAATATAGGTGGTTCTGGTGCTTGTATGAAGGAGGCTTTAACTAAAAGGTATCCTCCTCGTAAAAAAGTTGCAGCGTTAAGAGATTTTCCACGTTTATGTGGACGCAATACTCCCCGTCTCAGCCAGGATGAGTGTCTAAAGGAGCTCGCTTCTTTGAAAGAAGTTGCAGCTACTGACCTACAAGAAGCAGAAAATAACAAAAGAAAGGTTGCCAACCTTGTTGAAGCTGATTTTGAAGGGAATGCAGTCAAGAAGCTGGATGTAGCTGAACCATCTACTGAGATGAGATTGGCGCTGGATAATCATCATCAGGTTAAAGCGGAAAACATGAACACCGTTAAGGTCGAGGGAACATCAGAGCTAGATATTGATTGCCCAGAACTCGAAAGTAGTTTGAAGGTCTCACCAGGCAGGAAAGTAGTGCTAGGTTTGACGGCCAAGTCAGAATGTCCTTGGGGATCTGATATTTGTTCCCCCGAATTTAAACCAACATCCATTGGTGGTACAGATAACAGGAAGGGAAAGAAAGTTGATTTTTATGCCCACCTGGACAGGTCTAAAACTGCGACCAAGTCCAAAGGTGTACTATATCATTCTGGGCACCAGCCGTTGAAAAAGAAAAGAGAAAATTCTAGTTCTGATGACATGGGTCAATTCGTAACACGGGAGAAGAATTCTCTAGATCCTAATGAAAATAACAAACACTTTAAAAGTGTCCCAAAACCACGTGGTTATGTAAATGTTTTTCCTCTTGGTCGTAGTAATTTAAGTGGTCATGAGAGTGACTCAGTGGCCCGGAATAAAGTGAGGAAAACATTGCGCCTGTTCCAAGCTGTTTGTAGAAAGCTTTTGCAGGAAGCGGAAGCAAAACCAAAGTCAAATGTGAAAGAATCAAAGAGGGTTGATTTACAAGCTTCAAAAATACTTAAGGAGAAAGGGAGCTATGTTAATGAAGGGGAGAAGATCATGGGATCTGTTCCTGGGATTGAAGTTGGTGATGAATTTCAATACAGAGTAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGCGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAGCCAGAAGATCAGAAGCTTGAACGGGGCAATCTTGCTTTGAAGAACAGTAGTGAGGTCAAGAATTCTGTTAGGGTGATACGGGGCTCTGAATCAGCGGATGGAAAAAGCAAGATATATGTTTACGATGGACTCTATGAAGTTGAGTCATATTGGCAGGATATGGGGCCACATGGGAAGCTGGTTTATAAGTTTCGCTTGCGAAGAAAGCCGGGTCAACCAGAGCTTGCTTGGAAGGAACTGAAGAAATCTAAAAAGTTCAAAAAAAGAGAAGGTGTATGCGTTGTAGATATTTCCTACGGGAAAGAGAAAATTCCCATATGTGCCGTGAACACCATAGATGAAGAGAACCCCCCTCCATTTAAATACATAACTAAGATGATGTATCCTGATTGTTGCAATATTGTCCCTCCAAAAGGCTGTAATTGTACTAATGGATGCTCTGACCACGAGAAATGTTCTTGTGTACTCAAAAATGGGGGGGAGATTCCATTCAATCATAATGGAGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGGCCTAAATGCAAGTGCCCTCCAACCTGTTATAATAGAGTCAGCCAACTTGGCATAAATATTCAACTCGAAATTTTTAAAACCAAGTCAATGGGATGGGGTGTAAGATCCTTGAATTCCATCCCTTCTGGAAGTTTTATCTGTGAATATACTGGAGAGGTTCTTGAGGACAAGGAAGCTGAACAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACAAAAACAACAGTAATCTTTGGGATGGACTTTCGAACCTTTTGCCAGATTCGCACTTAAGTTCAAGTGAAGAAGTGAATGATGTTGGCTTCACTATCGATGCCGCTCAGTTTGGTAATGTGGGGAGATTCATTAACCATAGTTGCTCCCCCAATCTCTATGCCCAGAATGTCCTTTATGATCACCATGACAACAGGGTTCCTCATGTCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGATTACAATTACACGATAGATCAAGTTCGTGATTCCGATGGCAATATCAAAAAGAAATACTGCTTTTGTGGTTCTGTGGAATGTACTGGTTTCCTCTATCGGAGGTAA 3165 0.418 MNSEPSMLVCDEHSEEELGKPVMVNGDSTVVDPPKFKRRKVSAVRDFPEECGPFGSADGTSVEVKSGEDLGGGDSGEADSPNDEKDPQNFEFNEDLFVADTVEQTSDCSLKEDPVVLSDQVDVGSFANDEPAKVELVGVEAMDISFETEDCSLKKEDPAVSSHQVDGDILVNDEASKVELVGMEAVDMQLETEDCSLRKEDPMVSSHQLDVPILDNNEDTKLTLVGMETLDAELATESCSLKNENAAILSYQIDESTLANDGPAELALVGMETSDMEFTTEGSVKQDLSYISEAPAPVGEVAMSDNSKSSLSNINIGGSGACMKEALTKRYPPRKKVAALRDFPRLCGRNTPRLSQDECLKELASLKEVAATDLQEAENNKRKVANLVEADFEGNAVKKLDVAEPSTEMRLALDNHHQVKAENMNTVKVEGTSELDIDCPELESSLKVSPGRKVVLGLTAKSECPWGSDICSPEFKPTSIGGTDNRKGKKVDFYAHLDRSKTATKSKGVLYHSGHQPLKKKRENSSSDDMGQFVTREKNSLDPNENNKHFKSVPKPRGYVNVFPLGRSNLSGHESDSVARNKVRKTLRLFQAVCRKLLQEAEAKPKSNVKESKRVDLQASKILKEKGSYVNEGEKIMGSVPGIEVGDEFQYRVELNIIGLHRQIQGGQGGNVMSSDKEPEDQKLERGNLALKNSSEVKNSVRVIRGSESADGKSKIYVYDGLYEVESYWQDMGPHGKLVYKFRLRRKPGQPELAWKELKKSKKFKKREGVCVVDISYGKEKIPICAVNTIDEENPPPFKYITKMMYPDCCNIVPPKGCNCTNGCSDHEKCSCVLKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPPTCYNRVSQLGINIQLEIFKTKSMGWGVRSLNSIPSGSFICEYTGEVLEDKEAEQRTGNDEYLFDIGNNKNNSNLWDGLSNLLPDSHLSSSEEVNDVGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHHDNRVPHVMLFAAENIPPLQELTYDYNYTIDQVRDSDGNIKKKYCFCGSVECTGFLYRR 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00530 1054 SMART preset_2 772 863 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo5g00530 1054 ProSiteProfiles YDG domain profile. 600 746 IPR003105 -
Mepo5g00530 1054 ProSiteProfiles SET domain profile. 879 1022 IPR001214 GO:0005515
Mepo5g00530 1054 ProSiteProfiles Pre-SET domain profile. 816 876 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo5g00530 1054 ProSiteProfiles Post-SET domain profile. 1036 1052 IPR003616 -
Mepo5g00530 1054 CDD SET_AtSUVH-like 796 1023 - -
Mepo5g00530 1054 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 514 1045 - -
Mepo5g00530 1054 Gene3D - 669 766 IPR036987 -
Mepo5g00530 1054 Gene3D - 620 668 IPR036987 -
Mepo5g00530 1054 Pfam SET domain 890 1022 IPR001214 GO:0005515
Mepo5g00530 1054 SUPERFAMILY SET domain 761 1028 IPR046341 -
Mepo5g00530 1054 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 501 1053 IPR025794 GO:0016571
Mepo5g00530 1054 Pfam SAD/SRA domain 667 750 IPR003105 -
Mepo5g00530 1054 Gene3D SET domain 767 1052 IPR046341 -
Mepo5g00530 1054 SMART set_7 879 1028 IPR001214 GO:0005515
Mepo5g00530 1054 Coils Coil 360 387 - -
Mepo5g00530 1054 SUPERFAMILY PUA domain-like 623 759 IPR015947 -
Mepo5g00530 1054 SMART G9a_1 633 750 IPR003105 -
Mepo5g00530 1054 Pfam Pre-SET motif 775 871 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo5g00530 1054 MobiDBLite consensus disorder prediction 1 89 - -
Mepo5g00530 1054 MobiDBLite consensus disorder prediction 32 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00530 Mepo-Chr5 4594720 4598717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00530 580 1049 Su(var)3-9 homologs AT5G04940 37.452 8.80e-102 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo5g00530 SET 4.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00530 K11420 - gmx:100803378 1040.02