Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00529 ATGGGTAAACAAGGACCTTGCCATCACTGTGGAGTTACCAGCACACCACTTTGGCGCAATGGGCCACCAGAGAAGCCCATACTATGCAATGCATGTGGTTCGCGGTGGAGGACAAAGGGAACACTTGCAAATTACACACCTTTACATGCTCGGGCTGAAACTGATGATTTTGATGATCAAAGGGCTTCAAGGATGAAGAGTATATCGTTGAATAAGAACAAAGAAGTGAACTTGCTCAAACGGAAGCAGAACCACAATAATGTAGTATCTGGAGGACATTCATCTGATTACAACCAGGGACTCCAAAAGGCTTTTGATGAAGATATGAGTAATCGATCAAGTTCAGGATCAGCATTGTCTAACTCGGAAAGCTGCGCACAATTTGGTGGCACAGATGCTAGTGATCTAACAGGACCTGCTCAGTCAGTGGTCTGGGATACCACTCCCACAGTGCCTTCAAAAAAGAGGACATGTGTAGGTCGTCCAAAGCAGCCATCTTCTGTTGAGAAGCTCACAAAAGATTTATGCACTATTCTTCATGAACAACAATCTTGTTTTTCTGAATCTTCTGATGGGGATCTTCTTTATGAAAGTGAAGCACCGATGGTCTCTGTTGAGATAGGACATGGAAGTGTTCTCATTAGGCATCCTAGTTATGTAGCTCGTGACGAAGAGTCTGAAGCTAGCTCTCTTTCATTTGATAATGGACTATACCCAATGAGTGACGCATATTCTTATTCTGGCGCCGTTCTTAAAAGTGACAAGTCTCAGCTGGAAAGAGTACAAATCCTTGGAAATCATGATTCACCCTTGTGTTTAGTGGATTTAAATGATGTGGTAAACTATGAAGAGTTTACGAGGAACTTGTCATATGAAGAGCAGCAACAATTATTGAAGTTTCTTCCTGTGGTTGATACTGCTAAACTTCCTGATGGCCTTAAGGTCATGTTCGGTAGCTCTCAATTTAAGGAGAACTTAACTAATTTTCAGCAGCTTCTTGCAAAAGGTGCCTTTGATATCTCTTTGGCGGATGTAAAACCTGAAGACTGCGAGACTTTGAAAAGATATGCACTAAATGAGTTGTCAAAGTCGAAATGGGTGGAACACTATCATAACAAGAGATGTAAAAGTAGGGCTGAAAAATCGGATGTTCCAGGATCTGCTGGTATATCATCAACCAATGTTGCAAATGTGAAGAGAATGCGTTATAGCAGAAATCAGAACTTTCCAGAGATGAAGACAATAATGAGGAGTCCCAAAAGAATGATCACAAAGACTAGTTATAATCCAAAAAGCCTATTTCCTTTGCCTCCTGATGCAAGCTCACACTTGCTAGATTCTTTTAACTTTGTTGAGGAGAGTTCTGATCAAGATCTGCTGCTAGAAGTGCCTTCTAATAATTCTTTTCCACAGGCAGAACTTCTGCCCCCAACTTCAATCTTTGGTGCTCAAGCCAGCACTAGTAGTAGCTCAGCATACTCACATTTTGTGAACCATTAA 1500 0.4147 MGKQGPCHHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLANYTPLHARAETDDFDDQRASRMKSISLNKNKEVNLLKRKQNHNNVVSGGHSSDYNQGLQKAFDEDMSNRSSSGSALSNSESCAQFGGTDASDLTGPAQSVVWDTTPTVPSKKRTCVGRPKQPSSVEKLTKDLCTILHEQQSCFSESSDGDLLYESEAPMVSVEIGHGSVLIRHPSYVARDEESEASSLSFDNGLYPMSDAYSYSGAVLKSDKSQLERVQILGNHDSPLCLVDLNDVVNYEEFTRNLSYEEQQQLLKFLPVVDTAKLPDGLKVMFGSSQFKENLTNFQQLLAKGAFDISLADVKPEDCETLKRYALNELSKSKWVEHYHNKRCKSRAEKSDVPGSAGISSTNVANVKRMRYSRNQNFPEMKTIMRSPKRMITKTSYNPKSLFPLPPDASSHLLDSFNFVEESSDQDLLLEVPSNNSFPQAELLPPTSIFGAQASTSSSSAYSHFVNH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00529 499 Gene3D - 265 364 IPR038108 -
Mepo5g00529 499 Gene3D - 3 87 IPR013088 GO:0006355|GO:0008270
Mepo5g00529 499 MobiDBLite consensus disorder prediction 107 154 - -
Mepo5g00529 499 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Mepo5g00529 499 Pfam Asx homology domain 256 356 IPR028020 -
Mepo5g00529 499 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Mepo5g00529 499 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Mepo5g00529 499 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Mepo5g00529 499 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Mepo5g00529 499 MobiDBLite consensus disorder prediction 107 165 - -
Mepo5g00529 499 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 267 376 IPR044867 -
Mepo5g00529 499 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Mepo5g00529 499 PANTHER OSJNBB0038F03.10 PROTEIN 1 497 IPR044589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00529 Mepo-Chr5 4555298 4560034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00529 1 475 C2C2-Gata Transcription Factor Family AT4G17570 51.362 4.10e-146 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo5g00529 ASXH 2.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00529 - - gmx:100798504 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00529 5 4555298 4560034 Mepo1g01668 1 16461902 16467899 PCT