Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00510 ATGGCTTCTTTCTCTACTCTTTCCATAATTTCCATTATTTTTCTTCAACTTGTGTTAGCCTTTGGAAACGTTTCTCCAAGTTCAAGACTCTCCACCACTAACAACAACAACAATCCATGGCTATCACCTTCTGGTGAATTCGCTTTCGGATTTCGTAATACCACAACAAACTTCTTCATGCTTGCAATATGGTACAATAACATACATGATCAAACCATTGTTTGGAGCGCCAAAGACATGAACAACAGCAACAACCTCGTACTAGCACCAACAGGATCACAGGTTCAGCTAACATCAGGTGGACTTGCTTTGACAAATCCACAAAATGAATCCATTTGGACAGCACAACCAAACGATATTGTTTCCTATGGAACCATGCTTGATAATGGAAACTTTGTTCTTGTAAACAACAAATCTGCTATTGTTTGGGAAAGTTTTAAGTTTCCTACTGATACCCTTTTGCCTAATCAATCACTTGAATTAGGTGCCACCTTAACTTCAACATTCTCAGAGACCAATTTCACAAGTGGAAGGTTTCAACTTTATTTTAATAATGATGATCATAATCTCATGTTAAGTCCACTTGCATGGCCTACTCAATTTCGTTACAATTTTTACTATAGAATTGATGTTAATAACTCTGCATCTTCAAGTTTAGTTTTTGATGAATCAGGAGATATTTATGTGGAAGCAAATAATAATGGTACTACTAGAATCAAACCTCAAGGTACACAATGGAAAAATTTAGATCTTGATCCTAAGTTGTATTATTATAGAGCAACCCTTGATTATAATGGAGTTTTCACACAATATTCTCATCCAAGGGACACTAAAGCAAAACAAGGATGGACTATTATGAGGTATGTTCCTGATAACATCTGCACTGCTATATCCAATGAAATGGGAAGTGGAACATGTGGTTATAATAGCTATTGTTCCATGGAAAATCAGAGACCTACTTGTAAATGTCCTTATGGTTATTCATTGATAGATCCAAGTAATCAATTTGGCGGGTGTCAACTCAATTTCACACTTGGTTGTGGAGCTGATAATGGTGAAGGATTGAATGTGAAGCTAGAAGATTTATATGAGTTTACTGTTCTTACAAATGTGAATTGGCCATTATCAGATTATGAACGGATACAGCCTTATTCTCAACATGACTGTCAACAATCTTGTTTGCATGATTGTATGTGTTCTGTTGTTGTCTTCAGAGACCAAAAATGTTGGAAGAAAAGATCGCCTCTAGCTAATGGAAGAGAAGAAAGTGGTGGTAATTTAATACTTATCAAGACAAGAGTTTCTCCTCTTGGTAAAATAGATACTAGTCCTTCCACTAATTTGAAGAAAGACAACCGAGTTAACCCGATTCTTCGAGGTCTACTAATTGGTTCAGCTGTCTTCAATAGCATACTCTTGGCTGCGGTTGTTTTGGTGATTTTGTTGAAGCCGAGAAGGGTTGTCGTAGGCGCAACTCTCTTGGAAACAAATTTATGTTCGTTTAGTTATGATGCGTTAAAAGAAGCTACATGGGGTTTTATTGAAGAACTAGGTAGGGGTTCCTTTGGAATTGTTTTCAAAGGTGAATTGAAAGCAGCAACGTTTTGTAATGTTGTTGCTGTTAAGAAATTGGATCGGTTAGCGCAAGATCGTGAGAAGGAATTTAAGACTGAGTTGAGAGCCATTGGTAAAACCTACCACAAAAACTTGGTCAAGTTGATTGGATATTGTGATGAGGGAATGCATAGAATGTTGGTGTATGAGTTTATGAACAATGGCAGCCTTGCAAACATCTTGTTTGGACAAACAAAACCCACTTGGAATCAAAGGATTGGATTTGCTTTGGGGATTGCAAGAGGATTGGTGTATTTACATGAAGAGTGTGACACTCCCATCATTCATTGCGACATAAAGCCTCAAAATATACTCATAGATGAGTATTTTACGGCAAAGATCTCTGACTTTGGTTTAGCCAAGTTGCTGCTGGCTGATCAAAGTAGAACAAATACAATGATCCGAGGAACGCGAGGATATGTGGCTCCTGAATGGTTCAAGAATGTCCCTGTGACAGCTAAAGTGGATGTTTACAGCTTCGGTGCCATGTTGTTGGAAATTGTTTGCTGCAGAAAAAGTGTGGTGCTGATGGAGTCAGGGGAGGAAGAAAAGGCAATTTTGACAGATTGGGCTTGTGATTGTTATACGGAAGGGAGAATAGATGCTTTGGTGGAGAATGATCAAGAGGCCTTGGATGACATTGACAGGTTAGAAAAGTGGATAAAGATAGCAATCTGGTGCATTCAAGAACATCCTGAACTGAGGCCAACAATGAGGATGGTCATGCAAATGCTTGAAGGCTTCTCAGCTTGGATTTCAGCTTTTGATTTTGCTCCTCCGGTATCACGCTATTGTACCAGCTTTGTAGGTCTCAATGCACTTGTATCAGTGTCCAATGATGTTAAGCGTGCTTCTCCATTACAAACAGGACTTCCATGA 2493 0.3851 MASFSTLSIISIIFLQLVLAFGNVSPSSRLSTTNNNNNPWLSPSGEFAFGFRNTTTNFFMLAIWYNNIHDQTIVWSAKDMNNSNNLVLAPTGSQVQLTSGGLALTNPQNESIWTAQPNDIVSYGTMLDNGNFVLVNNKSAIVWESFKFPTDTLLPNQSLELGATLTSTFSETNFTSGRFQLYFNNDDHNLMLSPLAWPTQFRYNFYYRIDVNNSASSSLVFDESGDIYVEANNNGTTRIKPQGTQWKNLDLDPKLYYYRATLDYNGVFTQYSHPRDTKAKQGWTIMRYVPDNICTAISNEMGSGTCGYNSYCSMENQRPTCKCPYGYSLIDPSNQFGGCQLNFTLGCGADNGEGLNVKLEDLYEFTVLTNVNWPLSDYERIQPYSQHDCQQSCLHDCMCSVVVFRDQKCWKKRSPLANGREESGGNLILIKTRVSPLGKIDTSPSTNLKKDNRVNPILRGLLIGSAVFNSILLAAVVLVILLKPRRVVVGATLLETNLCSFSYDALKEATWGFIEELGRGSFGIVFKGELKAATFCNVVAVKKLDRLAQDREKEFKTELRAIGKTYHKNLVKLIGYCDEGMHRMLVYEFMNNGSLANILFGQTKPTWNQRIGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEYFTAKISDFGLAKLLLADQSRTNTMIRGTRGYVAPEWFKNVPVTAKVDVYSFGAMLLEIVCCRKSVVLMESGEEEKAILTDWACDCYTEGRIDALVENDQEALDDIDRLEKWIKIAIWCIQEHPELRPTMRMVMQMLEGFSAWISAFDFAPPVSRYCTSFVGLNALVSVSNDVKRASPLQTGLP 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00510 830 SMART serkin_6 511 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00510 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 790 - -
Mepo5g00510 830 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Mepo5g00510 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Mepo5g00510 830 FunFam S-receptor-like serine/threonine-protein kinase 484 589 - -
Mepo5g00510 830 Gene3D - 28 147 IPR036426 -
Mepo5g00510 830 ProSitePatterns Protein kinases ATP-binding region signature. 517 543 IPR017441 GO:0005524
Mepo5g00510 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 199 IPR036426 -
Mepo5g00510 830 Pfam PAN-like domain 364 414 IPR003609 -
Mepo5g00510 830 PIRSF SRK 1 805 IPR024171 GO:0004674
Mepo5g00510 830 Gene3D Phosphorylase Kinase; domain 1 482 589 - -
Mepo5g00510 830 Gene3D Transferase(Phosphotransferase) domain 1 590 789 - -
Mepo5g00510 830 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 32 788 - -
Mepo5g00510 830 ProSiteProfiles Protein kinase domain profile. 511 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00510 830 Pfam Protein kinase domain 514 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00510 830 Pfam D-mannose binding lectin 72 162 IPR001480 -
Mepo5g00510 830 Gene3D - 148 279 IPR036426 -
Mepo5g00510 830 SUPERFAMILY Protein kinase-like (PK-like) 500 784 IPR011009 -
Mepo5g00510 830 SMART blect_4 31 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00510 Mepo-Chr5 4413554 4416872 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00510 497 801 Receptor kinase-like Gene Family AT5G45780 41.401 2.29e-65 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo5g00510 Pkinase 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00510 - - lja:Lj2g3v1989170.1 1063.52