Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00506 ATGGTTTTTATTGAAGAACTAGGTAGAGGTTCCTTTGGAATTGTTTACAAAGGTAAATTAAAAGCAGCAGCGTCTTGTAGTGTTGTTGCAATTAAGAGATTGGATCGGTTAGCGCAAGACCGGGAGAAAGAATTTAAGACTGAGTTGAGGGCCATTGGTAAAACCTGCCACAAAAACTTGGTAAGGTTGATTGGATATAGTGATGAGGGAAATCATAGAATGTTGGTGTATGAGTTCATGAGCAATGGTAGTCTTGCAGACATCTTGTTTGGAACCAAAGGGTTGGATTTGCCTTGGGGTTTTCCAGAGGGTTGGTGTATTTACATGAAGAGTGTGACACTCCCATCATTCATTGTGACAAAGCCTCAAAGTATACTCATACATGAGTACTTCACGGTGAAGATTTCTGACTTCGGATTGGCTAAGTTGTTGTCGGCTGATCAAAGTAGAACGAAAACCATTATCAGAGGATCACGAGGATATGTGGCTCCTGGATGGTTCAAGAATATTCCTGTGACAGCTAATATTTGA 531 0.4068 MVFIEELGRGSFGIVYKGKLKAAASCSVVAIKRLDRLAQDREKEFKTELRAIGKTCHKNLVRLIGYSDEGNHRMLVYEFMSNGSLADILFGTKGLDLPWGFPEGWCIYMKSVTLPSFIVTKPQSILIHEYFTVKISDFGLAKLLSADQSRTKTIIRGSRGYVAPGWFKNIPVTANI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00506 176 SUPERFAMILY Protein kinase-like (PK-like) 3 173 IPR011009 -
Mepo5g00506 176 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 174 - -
Mepo5g00506 176 Gene3D Transferase(Phosphotransferase) domain 1 120 176 - -
Mepo5g00506 176 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00506 176 Gene3D Phosphorylase Kinase; domain 1 7 81 - -
Mepo5g00506 176 Pfam Protein tyrosine and serine/threonine kinase 2 89 IPR001245 GO:0004672|GO:0006468
Mepo5g00506 176 ProSitePatterns Protein kinases ATP-binding region signature. 7 32 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00506 Mepo-Chr5 4403198 4403728 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00506 7 167 Receptor kinase-like Gene Family AT2G23950 39.766 2.54e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo5g00506 PK_Tyr_Ser-Thr 2.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00506 - - gsj:114376498 215.698