Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00489 ATGGTGAAGATAGGTTTTGGTACATTTGATGACTCTTTTAGCGTTGCCTCCCTTAAGGCTTATCTATCAGAGTTCATTGCCACTCTCATTTTTGTGTTCGCTGGAGTTGGATCAGCAATTGCTTACAATGATCTAACATCAGATGCAGCCTTGGATCCAGCGGGTTTAGTGGCAGTAGCTGTGGCTCATGCATTTGCACTATTTGTTGGTGTGGCCATAGCAGCCAACATCTCAGGTGGACATTTGAACCCTGCTGTTACTTTTGGATTAGCCATTGGAGGCAACATCACTATCCTAACTGGTCTCTTCTATTGGATTGCCCAATTGCTTGGCTCCATTGTTGCATCTCTCCTCCTCAATTATGTCACCGCTAAGAGTGTTCCAACCCATGGAGTGGCTGCTGGACTGAACCCTATTGCTGGATTAGTGTTTGAGATTATCATAACATTTGGATTGGTTTACACTGTTTATGCCACAGCAGCTGACCCCAAAAAGGGCTCGATTGGAACCATTGCACCCATTGCTATTGGGTTCGTTGTCGGTGCCAACATCTTAGCCGCCGGTCCATTCAGCGGCGGTTCAATGAACCCGGCTCGCTCATTCGGCCCAGCTGTGGTTAGTGGAAACTTTGCTGATAACTGGATCTATTGGGTTGGACCATTGATAGGAGGAGGCTTGGCTGGGTTGATTTATGGTGACGTCTTTATTGGTTCATATACCCCAGCACCAGCATCTGATTTCTAA 744 0.4664 MVKIGFGTFDDSFSVASLKAYLSEFIATLIFVFAGVGSAIAYNDLTSDAALDPAGLVAVAVAHAFALFVGVAIAANISGGHLNPAVTFGLAIGGNITILTGLFYWIAQLLGSIVASLLLNYVTAKSVPTHGVAAGLNPIAGLVFEIIITFGLVYTVYATAADPKKGSIGTIAPIAIGFVVGANILAAGPFSGGSMNPARSFGPAVVSGNFADNWIYWVGPLIGGGLAGLIYGDVFIGSYTPAPASDF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00489 247 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Mepo5g00489 247 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g00489 247 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g00489 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g00489 247 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g00489 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g00489 247 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g00489 247 PANTHER AQUAPORIN-8 5 237 IPR034294 -
Mepo5g00489 247 NCBIfam MIP family channel protein 23 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g00489 247 FunFam Probable aquaporin TIP1-1 2 246 - -
Mepo5g00489 247 SUPERFAMILY Aquaporin-like 15 238 IPR023271 -
Mepo5g00489 247 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g00489 247 Pfam Major intrinsic protein 14 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo5g00489 247 Gene3D Glycerol uptake facilitator protein. 2 240 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00489 Mepo-Chr5 4267591 4269360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00489 1 246 Major Intrinsic Protein MIP AT5G47450 79.352 3.67e-136 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00489 K09873 - fve:101300912 410.994