Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00479 ATGGATACACCTACTCTTTTACATTCTTTGCAATTGCTTTTGGTTTTCACTTGCATGTTGTTAAATGCAGGAATAGTGACACTAGCTGCTGCACGCCATCACCACCACACTACCTTCAATACATTGTCTACTACAAACTCTTCCAAGAACCACTGGATTGGACCCGTCGGTAACCGTGTAATCACGGTTGATATTAACGGTGGAGGTCAGTTCCAGTCCGTCCAAGACGCCGTAAATTCCGTCCCAGATAACAATACAATGATTGTCCTTATTCAAATCAGTGCTGGATTCTACAAAGAGAAGGTGGTAGTTCCCGTGACAAAGCCGTACATAACATTTCAAGGAGAAGGGAGAGAAGTAACAGTAATAGAATGGCATGATAGAGCTTGTGATCCTGGTCCCAACGGACAACAGCTACGTACTTATAGAACTGCTTCTGTCACTGTCTTTGCCAACTATTTCTCTGCAAAGAATATCACCTTCAAGAATACAGCGCCTGCACCGATGCCTGGAATGCAAGGATGGCAAGCCGTGGCGTTTCGCATATCAGGAGACAAAGCATACTTCTCTGGCTGTGGCTTCCACGGAGCACAAGACACACTTTGCGACGATGCTGGTAGGCATTACTTCAAGGAATGCTACATTGAGGGCTCCATTGATTTCATTTTTGGTAATGGTAGATCCATGTACAAGGATTGTGAGCTACATTCAATAGCAACAAGGTTTGGATCCATAGCAGCACAGGATAGACAGTACCCAGACGAGAAGACAGGCTTCACATTTGTACGATGCAAGGTGACAGGTTCAGGCCCACTATATGTAGGACGTGCAATGGGGCAATACTCAAGAATAGTTTATGCCTATACATACTTTGATGATATAGTTGCACACGGTGGTTGGGATGATTGGGACCACGCTAACAACAAAAACAAGACTGTGTTCTTTGGAGTGTACAAATGTTGGGGACCAGGAGCAGAGGCAGTACGTGGGGTGTCATGGGCACGAGAGTTGGATTTCGAAACAGCACATCCATTTATCAGGAAGAGCTTCGTCAATGGGAGACATTGGATCGCACCTACTGATGCTTAG 1089 0.4527 MDTPTLLHSLQLLLVFTCMLLNAGIVTLAAARHHHHTTFNTLSTTNSSKNHWIGPVGNRVITVDINGGGQFQSVQDAVNSVPDNNTMIVLIQISAGFYKEKVVVPVTKPYITFQGEGREVTVIEWHDRACDPGPNGQQLRTYRTASVTVFANYFSAKNITFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFHGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRQYPDEKTGFTFVRCKVTGSGPLYVGRAMGQYSRIVYAYTYFDDIVAHGGWDDWDHANNKNKTVFFGVYKCWGPGAEAVRGVSWARELDFETAHPFIRKSFVNGRHWIAPTDA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00479 362 Gene3D - 57 362 IPR012334 -
Mepo5g00479 362 Pfam Pectinesterase 61 353 IPR000070 GO:0030599|GO:0042545
Mepo5g00479 362 SUPERFAMILY Pectin lyase-like 57 360 IPR011050 -
Mepo5g00479 362 ProSitePatterns Pectinesterase signature 2. 215 224 IPR033131 -
Mepo5g00479 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 57 358 - -
Mepo5g00479 362 FunFam Pectinesterase 56 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00479 Mepo-Chr5 4168802 4171262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00479 9 362 Carbohydrate Esterase AT5G47500 71.468 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00479 - - cam:101501763 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00479 5 4168802 4171262 Mepo5g00479 5 4168802 4171262 ECH