Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00475 ATGGCTTCTCCCATATTTCTAGCACTACTCTGTTTCATACTCTGTTTTTCACCTTCATCTCAAACAATTCTATTACCCTTAACACACTCAATCTCCAAAACCCAATTCAACAGTACCCACCACCTTCTCAAATCAACCTCAACCCGTTCCAAAGCTCGTTTCCATCACCAACACCACAAACACCAAATCCAAGTTTCTCTCCCTCTTGCTCCAGGTAGTGATTACACTCTCTCCTTCAACTTAGGTTCAAACCCTCCACAACTCATAACACTCTACATGGACACAGGTAGTGACCTTGTTTGGTTCCCTTGTTCACCTTTCGAATGCATTCTCTGTGAAGGAAAACCACAAACAACAAAACCAGCAAATATCACAAAACAAACACACTCTGTTTCTTGTCAATCCCCTGCATGTTCCGCAGCACATGCATCCATGTCTTCTAGTAACCTTTGTGCTATTTCACGTTGTCCTTTAGATTTCATCGAAACTTCTGATTGTTCTTCTTTCTCTTGTCCACCTTTTTACTATGCTTATGGTGATGGAAGCTTCGTAGCTAATCTCTATCAACAAACACTGTCTCTCTCTTCTCTTCATCTTCGGAATTTCACTTTTGGTTGTGCTCATACTGCACTTGCTGAACCCACCGGAGTTGCTGGTTTTGGCCGTGGAATTTTGTCTCTTCCGGCACAGCTTTCTACTCTTTCACCTCATTTGGGTAACCGTTTTTCTTATTGTTTAGTTTCTCACTCTTTCGACGGTGACAGAGTCCGGCGACCGAGTCCACTCATTCTCGGTCGTCACAATGACACCATAACCAACGCCGGAGACGGAGAATCTGTTGAGTTTGTCTATACTTCCATGCTTTCAAACCCAAAGCATCCTTATTACTACTGTGTCGGACTCGCCGGAATATCCGTTGGGAAAAGAACGGTACCGGCGCCGGAGATTCTCAAAAGGGTGGATGAAAAAGGTAACGGCGGAATGGTTGTTGACTCAGGAACAACGTTTACGATGTTGCCTGAGAGTTTTTACAACGCGGTGGTTACTGAGTTTGATAAACGAGTTAACCGATTTCATAAACGAGCAAGTGAGATAGAAACTAAAACGGGTCTTGGACCGTGTTATTATTTAAATGGGTTATCACAGATACCGGTGTTGAAACTTCATTTTGTTGGGAATAATTCTGATGTGGTGTTGCCTAGGAAGAATTATTTCTATGAATTTATGGACGGTGGTGATGGGTTGAGGAAGAAGGGGAAAGTGGGGTGTATGATGTTGATGAACGGTGGAGATGAAACTGAGTTGGATGGTGGACCTGGAGCTACTCTAGGGAATTATCAACAGCAAGGGTTTGAGGTGGTTTATGATTTGGAGAAAGAGCGCGTGGGTTTCGCAAAGAAAGAGTGCGCGTTGCTTTGGGATAGTCTTAACAGTGACAAAAACTAG 1446 0.4343 MASPIFLALLCFILCFSPSSQTILLPLTHSISKTQFNSTHHLLKSTSTRSKARFHHQHHKHQIQVSLPLAPGSDYTLSFNLGSNPPQLITLYMDTGSDLVWFPCSPFECILCEGKPQTTKPANITKQTHSVSCQSPACSAAHASMSSSNLCAISRCPLDFIETSDCSSFSCPPFYYAYGDGSFVANLYQQTLSLSSLHLRNFTFGCAHTALAEPTGVAGFGRGILSLPAQLSTLSPHLGNRFSYCLVSHSFDGDRVRRPSPLILGRHNDTITNAGDGESVEFVYTSMLSNPKHPYYYCVGLAGISVGKRTVPAPEILKRVDEKGNGGMVVDSGTTFTMLPESFYNAVVTEFDKRVNRFHKRASEIETKTGLGPCYYLNGLSQIPVLKLHFVGNNSDVVLPRKNYFYEFMDGGDGLRKKGKVGCMMLMNGGDETELDGGPGATLGNYQQQGFEVVYDLEKERVGFAKKECALLWDSLNSDKN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00475 481 ProSiteProfiles Peptidase family A1 domain profile. 75 465 IPR033121 -
Mepo5g00475 481 PANTHER ASPARTYL PROTEASES 6 463 IPR001461 GO:0004190|GO:0006508
Mepo5g00475 481 SUPERFAMILY Acid proteases 70 474 IPR021109 -
Mepo5g00475 481 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 328 339 IPR001969 GO:0004190|GO:0006508
Mepo5g00475 481 Gene3D Acid Proteases 271 473 IPR021109 -
Mepo5g00475 481 Pfam Xylanase inhibitor C-terminal 297 465 IPR032799 -
Mepo5g00475 481 Pfam Xylanase inhibitor N-terminal 75 249 IPR032861 -
Mepo5g00475 481 Gene3D Acid Proteases 57 265 IPR021109 -
Mepo5g00475 481 FunFam Probable aspartyl protease At4g16563 65 264 - -
Mepo5g00475 481 CDD pepsin_A_like_plant 75 469 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00475 Mepo-Chr5 4127357 4129117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00475 50 472 Miscellaneous Gene Families AT1G77480 26.222 1.91e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00475 - - gmx:100807884 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00475 5 4127357 4129117 Mepo5g00475 5 4127357 4129117 ECH
Mepo5g00475 5 4127357 4129117 Mepo1g01619 1 15935272 15937390 PCT