Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00452 ATGTTTCCCACTTCCTACAGTCTTATTTCATATAATAATACTATATATGCAAGAGGACCATATGATACAGCCATATATACATACATAGATACATATATCACTATATTGCTAGTAAACATGGCGGCTAGAGCAGGGGTATATTTGCTGGTCCTCATGAGCCTTGTCACTGCAGAATCCTCTATAACCCCATCAGAGTTCATCAAGTCCTCGTGTAGAGCTACTCGCTATCCTGTTTTATGTGTTCAATGTCTCATGGGATATGCGAGCGTGATTGGCCAAAGCGAGCGACAACTGACGACAACTGCTCTATCAGTGAGCATATCCAGGACACGATCGAGTGCATCGTTTGTAAAGAAGATATCAAAGGCAAGAGGTATCAAGCCAAGGGAGTACAGAGCCGTACAAGACTGCATAGAAAACATGGCCGACAGTTTGGACAGTCTTAGCCAATCGGTTAGGGAGTTAGGCAGTATTGGTCATGCTGTTGGAGAGGACTTCGTGTGGCACATGAGCAACGTGCAGACTTGGGTCAGTGCTGCACTTACTGATGATAACACTTGTCTTGATGGCTTTGCTGGTCCTTCCATGAATGGAATTGTTAAGGCTGCCATCAAGGACAGGGTTGTCAATGTTGCTCAAGTTACCAGCAACACACTCGCTTTGGTTAATCGCTTTGCCTCAAGCCATCGAACTGCAGAAACTCCTTAA 708 0.4463 MFPTSYSLISYNNTIYARGPYDTAIYTYIDTYITILLVNMAARAGVYLLVLMSLVTAESSITPSEFIKSSCRATRYPVLCVQCLMGYASVIGQSERQLTTTALSVSISRTRSSASFVKKISKARGIKPREYRAVQDCIENMADSLDSLSQSVRELGSIGHAVGEDFVWHMSNVQTWVSAALTDDNTCLDGFAGPSMNGIVKAAIKDRVVNVAQVTSNTLALVNRFASSHRTAETP 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00452 235 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 225 IPR035513 -
Mepo5g00452 235 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 225 IPR035513 -
Mepo5g00452 235 Pfam Plant invertase/pectin methylesterase inhibitor 66 221 IPR006501 GO:0004857
Mepo5g00452 235 NCBIfam pectinesterase inhibitor domain 46 223 IPR006501 GO:0004857
Mepo5g00452 235 PANTHER PECTINESTERASE INHIBITOR-LIKE 50 221 - -
Mepo5g00452 235 CDD PMEI-like_3 69 227 - -
Mepo5g00452 235 SMART PMEI_2 62 221 IPR006501 GO:0004857
Mepo5g00452 235 FunFam Pectin methylesterase inhibitor 1 62 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00452 Mepo-Chr5 3939849 3940898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00452 53 222 Carbohydrate Esterase AT3G14310 29.480 9.28e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00452 - - mtr:11427094 391.349