Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00440 ATGAACTCCTTCCATCTCCTCTTTTCTTTGTTTCTTTTCATTGCATTTACAACTTCACAAACTGTTCATGGAAATGCAGAGCTAAGAGCTTTGATGGATTTGAAAGCCTCTCTTGATCCAGAGGGAAAGATTCTTACCTCATGGATCAGTGATGGTAATCCATGTAGTGGTTCATTTGAAGGAGTTGCTTGCAATGAACATTGGAAAGTGGCTAATATCTCTTTGCAGGGAAAGGGACTTTCTGGTTCATTATCTTCAGCTGTGGCTGAACTCAAATGCTTGTCAGGGTTATACTTGCATTATAACAATCTTTCTGGTGAGATACCATCACAGATTTCAAATCTTACCGAACTTGTTGATCTCTATCTTGATGTTAACAGTCTTTCTGGAAGAATTCCCTCTGAGATTGGTAACATGGCTAGTCTGCAAGTACTTCAGTTGGGAGATAATCAATTGGTAGGGAATATACCTACACAGATGGGTTCCTTGAAGCAACTTACAACTCTTGCTTTGCAATATAACAATTTAACTGGTCAAATTCCTCTTAGCTTAGGGAACTTGGAAAACTTAAGCAGGCTAAATTTGAGCTTCAACAATTTCAGTGGTGCTATTCCAGCAACTCTAGCCAGTATTGCACATTTGGAAGTTATAGACATCCAAAACAATTCTTTGACGGGAACTGTTCCTTCTGCATTGAAGAGACTTGGGGAAGGATTCCAAGGGGCAAACAACCAAGGTTTATGTGGAGTAGGGATTTCTACTTTGAGAGCTTGCAACAAAGAACCAGATTTAAACGTCAGCAACATTGATACCTCGGATCAAGACCACCTCAAAAATAGTAATCCTGCAACGCCTCGCCCGGAGCCTGCGAATTTCCAAATGCATTGTAACCAGACACATTGCTCGAAATCAAGAAGTGTTCCTATAAGTGTCATCACAGCAAGTGTTGTAACCATCATCATACTCACAATAATAGGTGCTGGATTATTTACATTCGTCAAATACCGCCGTCGAAAGCAGAAGATTTCATCAAACTCTTCTGAAGGGAAACTCAGTCCTCAGCAACCTAAAGAGTTATACCGAAAAAGTCCATCTACACTTGTTAATCTTGACTATTATAATGGATGTTATCCAATGCCTGATGATCAAAATGCCGGTGGATTATCCAATGAATATCTAAACCAGTTTAGGTTTAATGTAGATGAAGTCGAATCTGCAACACAGTATTTTTCAGAAGCGAATTTATTGTGTAAGAGCAAATTCTCAGCAACGTATAAGGGAGTTCTCAGAGATGGATCTCTTGTGGCTATTACAAGCATTAACATGTCATGCTGCAAAACTGAGGAAGCCGAATTTGTAAAGGGATTGAGCTTATTAACCTCACTTAGACATGAAAACGTTGTCAAGCTAAGAGGTTTCTGTTGCTCAAGTAGTAGAGGTGAATGTTACCTTATCAACGACTTTGCTATGATGGGTGACCTGTCTCAATATCTTGACATAGAAGATAGAAGTGGCCCTTTGCTTGACTGGTCCAAGAGGGTTTCTATCATCAAGGGCATTGCAAAGGGTATAGGATATCTGCACAACAATGAAGCAAGCAAACCTACAATAGTACACCAAAATATATCAGTGGAGAATGTTCTTCTTGACAAAGATTTTAATCCATTGATCATGGATGCGGGACTTCCCAAGCTTCTTGCAGACGATGTTGTTTTCTCGGCTCTAAAAGTAAGTGCTGCTATGGGATACCTAGCTCCCGAATACATTACTACGGGACGCTTTACCGAGAAGAGTGACATATACGCATTTGGAGTTATTGTACTTCAAGTTTTATCCGGCAAGACAGCGATAGGTGGTTCAATACGGACAGCATTTCAATCTTTCAAATTTGATGATTGCATCGACACAAATCTAAAGGGAAGATATTCTAATTCTGAAGCAAGCATACTTACAAAGCTTGGAATGCAATGTATCCATGAGAGCCCCGATGAAAGACCAAACATGGTGGATGTGATTCAGGAGTTAAGCGTGTTTCCGGCTCATTCATAA 2049 0.3992 MNSFHLLFSLFLFIAFTTSQTVHGNAELRALMDLKASLDPEGKILTSWISDGNPCSGSFEGVACNEHWKVANISLQGKGLSGSLSSAVAELKCLSGLYLHYNNLSGEIPSQISNLTELVDLYLDVNSLSGRIPSEIGNMASLQVLQLGDNQLVGNIPTQMGSLKQLTTLALQYNNLTGQIPLSLGNLENLSRLNLSFNNFSGAIPATLASIAHLEVIDIQNNSLTGTVPSALKRLGEGFQGANNQGLCGVGISTLRACNKEPDLNVSNIDTSDQDHLKNSNPATPRPEPANFQMHCNQTHCSKSRSVPISVITASVVTIIILTIIGAGLFTFVKYRRRKQKISSNSSEGKLSPQQPKELYRKSPSTLVNLDYYNGCYPMPDDQNAGGLSNEYLNQFRFNVDEVESATQYFSEANLLCKSKFSATYKGVLRDGSLVAITSINMSCCKTEEAEFVKGLSLLTSLRHENVVKLRGFCCSSSRGECYLINDFAMMGDLSQYLDIEDRSGPLLDWSKRVSIIKGIAKGIGYLHNNEASKPTIVHQNISVENVLLDKDFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKTAIGGSIRTAFQSFKFDDCIDTNLKGRYSNSEASILTKLGMQCIHESPDERPNMVDVIQELSVFPAHS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00440 682 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 302 676 - -
Mepo5g00440 682 SUPERFAMILY L domain-like 27 233 - -
Mepo5g00440 682 Gene3D Phosphorylase Kinase; domain 1 382 488 - -
Mepo5g00440 682 Pfam Protein tyrosine and serine/threonine kinase 416 675 IPR001245 GO:0004672|GO:0006468
Mepo5g00440 682 Gene3D Ribonuclease Inhibitor 24 174 IPR032675 -
Mepo5g00440 682 MobiDBLite consensus disorder prediction 266 293 - -
Mepo5g00440 682 FunFam Protein NSP-INTERACTING KINASE 2 381 488 - -
Mepo5g00440 682 SUPERFAMILY Protein kinase-like (PK-like) 387 676 IPR011009 -
Mepo5g00440 682 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Mepo5g00440 682 Gene3D Ribonuclease Inhibitor 175 246 IPR032675 -
Mepo5g00440 682 ProSiteProfiles Protein kinase domain profile. 410 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00440 682 Gene3D Transferase(Phosphotransferase) domain 1 490 678 - -
Mepo5g00440 682 FunFam Protein NSP-INTERACTING KINASE 2 24 173 - -
Mepo5g00440 682 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00440 Mepo-Chr5 3868460 3872151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00440 6 523 Miscellaneous Gene Families AT4G22730 57.196 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Mepo5g00440 PK_Tyr_Ser-Thr 1.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00440 - - gmx:100777169 984.556