Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00431 ATGGAGGGTGCTAGCAATAGTGGTGCTTCAGATACTCCAATAGATTATCCTGCAGCTCCAAGAACCAGAATCCCATCTTTTGTCGGTGGACCCGCAGCTGATTCGACATCTCAGGGCAGCATTCCACCGATGCAGACGGTGGCGCCAGCAAAGAGGAAAAGGGGTCGCCCCAGAAAGTACGGACCAGACAGGTCTTTAAACTTGGTGATACCTCCCAAGCCAACACCTAGCTCCATCGGCAAAGCTGCCAAATCCGAGTTGGAGAATCCAGTAAATTTAGATCCTCATGAGGGCCCTATTGAAGGTCAAACTCAACACCCTCAAGAACTAGAGCATAAGGTGCCAGAAGGCACTACTTTTACACCCCGCATTATCGCAGTTAATTCTGGAGAGAATAAATGGCTACTACTTGTCTCTTGGTTGTCTCAGAATATTACTATGAAAGTAATGTCATTTTGTCAGCAAGGACCAGAAGCTATATGCATTATATCTGCAAATGGAGTCATATCAAGCGCCACCATTAGTCAGCCTCACTCGTCTGAAAAATTATCCACATATGAGGTGCAGCATTTCAATCTGATAGTAGGTAAATATGAAATTATATCTTTATCTGGCTCATTCATGCCAAACGGAAGTCGCAGTGGTGGTCTGAGTGTTTCTTTAGCGGGTCTAGATGGACATGTCGTTGGAGGTTACGTAGCTGGTCCATTGGTAGCTGCAAGTCCTGTAAATGTAGTGGTAAGCAGTTTTCTGGCAAATGAAGAGCAGAAGCTAAAAACGCAGGAAAATGAGGTGACTTCAACATCTACGCCAACGGCAGCTGCTCCTGTGACTACTGCCGGCCAATTGCTTGCAAGCTCAGTCAGTGCTACTTTTACACCTCATATTATCATTGTGAATGCTGGAGAGGATGTTTCTATGAAGATAATGTCATTTTGTCAGCAAGGACCAGAAGCTATATGCATTCTATCTGTAAATGGAGTCATGTCAAAAGCAGTCATTAGTCGGCCTCAATCGTCTCGAACATTATTCACGTATGAGGGTAGATATGAAATTCGAACTTTATCTGGCTCATTCATGCCAAAGGAAAAGCATGGAAGGCGGGGTATATCTGGTGGCATGAGTGTTTCTTTAGTGGATCTACATGGACATGTTGTTGGCGGTCACGTAACTGGTCCATTGGTGGCTGCAAGTCCTGTAAATGTAAGTACCTGGGTAGGGAATATGTCTTTTTCACAAACTAAAGTCTAG 1251 0.446 MEGASNSGASDTPIDYPAAPRTRIPSFVGGPAADSTSQGSIPPMQTVAPAKRKRGRPRKYGPDRSLNLVIPPKPTPSSIGKAAKSELENPVNLDPHEGPIEGQTQHPQELEHKVPEGTTFTPRIIAVNSGENKWLLLVSWLSQNITMKVMSFCQQGPEAICIISANGVISSATISQPHSSEKLSTYEVQHFNLIVGKYEIISLSGSFMPNGSRSGGLSVSLAGLDGHVVGGYVAGPLVAASPVNVVVSSFLANEEQKLKTQENEVTSTSTPTAAAPVTTAGQLLASSVSATFTPHIIIVNAGEDVSMKIMSFCQQGPEAICILSVNGVMSKAVISRPQSSRTLFTYEGRYEIRTLSGSFMPKEKHGRRGISGGMSVSLVDLHGHVVGGHVTGPLVAASPVNVSTWVGNMSFSQTKV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00431 416 Gene3D - 142 269 - -
Mepo5g00431 416 Gene3D - 294 414 - -
Mepo5g00431 416 ProSiteProfiles PPC domain profile profile. 127 272 IPR005175 -
Mepo5g00431 416 MobiDBLite consensus disorder prediction 89 108 - -
Mepo5g00431 416 ProSiteProfiles PPC domain profile profile. 289 416 IPR005175 -
Mepo5g00431 416 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 276 IPR039605 GO:0003680
Mepo5g00431 416 MobiDBLite consensus disorder prediction 1 82 - -
Mepo5g00431 416 Pfam Plants and Prokaryotes Conserved (PCC) domain 144 250 IPR005175 -
Mepo5g00431 416 Pfam Plants and Prokaryotes Conserved (PCC) domain 294 402 IPR005175 -
Mepo5g00431 416 CDD DUF296 121 250 IPR005175 -
Mepo5g00431 416 SUPERFAMILY AF0104/ALDC/Ptd012-like 291 402 - -
Mepo5g00431 416 SUPERFAMILY AF0104/ALDC/Ptd012-like 143 262 - -
Mepo5g00431 416 CDD DUF296 293 396 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00431 Mepo-Chr5 3801526 3804254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00431 277 402 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.937 1.28e-39 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00431 - - aew:130752346 199.519