Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00427 ATGGATCAAATAACATCACATGGACATTCACTTCCTCCACCTTTCCACACAGCAAGAGATCTTCATCTTCACCATCAACACCAACAGCAGCAACAACAACACCATCAATTCCACACTTTACAGCAGCAACAACAAACCACAGATCAAGATGAACAAAGTGGAAGTAGCAGCGGTGGTGGACTCAACCTCACAAACCGAGAGGAAAACAGCAACAACAAGTTCAACACCGATTTTAGTCCCAAGTTAGAATCCGGAGGAGGTGGTTCCGGTGGAGACACAGATTCAATGACAAGAAGACCAAGAGGAAGACCAGCTGGATCCAAAAACAAACCAAAACCACCGATTATCATCACACGTGACAGCGCAAACGCCTTGAAAACTCATGTGATGGAAGTTGCAGACGGTTGTGACGTGGTTGAAAGTGTCAACAACTTCGCTAGACGCCGTCAAAGAGGCGTTTGCATCATGAGTGGGACAGGAACGGTTACAAACGTGACACTAAGGCAACCGGCTTCTCCTGGAGCTGTTGTTACACTTCATGGAAGGTTCGAGATTCTTTCGCTGGCTGGATCGTTTCTTCCACCACCTGCTCCGCCCGCTGCTTCTGGTTTGACCATATATTTAGCGGGCGGACAAGGGCAGGTTGTTGGTGGAAGTGTTGTTGGTGCTTTGATTGCTTCTGGACCTGTTGTTATTATGTCTGCTTCTTTTAGTAACGCTGCTTATGAGAGACTTCCTTTGGAAGATGATGATGGTTCTTCTATTCAACAACTTCAAGGTGGTGGTGGTTCTCCAGGTGGTGGTGGTGGTGGTGTTCAGCAGCAACAACAGCTTTTAGGAGATTCAACTGCTCCACTTTTTCAAGCTATGCCTCCTCCTAATACTAATCCTAATCTTAATCCTAATCTTCTCGGTCAGATGCCTTCTGATAATTTCTGGCCAACCGGGCGTTCTCCGTATTGA 963 0.4663 MDQITSHGHSLPPPFHTARDLHLHHQHQQQQQQHHQFHTLQQQQQTTDQDEQSGSSSGGGLNLTNREENSNNKFNTDFSPKLESGGGGSGGDTDSMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDVVESVNNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEDDDGSSIQQLQGGGGSPGGGGGGVQQQQQLLGDSTAPLFQAMPPPNTNPNLNPNLLGQMPSDNFWPTGRSPY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00427 320 Pfam Plants and Prokaryotes Conserved (PCC) domain 126 239 IPR005175 -
Mepo5g00427 320 ProSiteProfiles PPC domain profile profile. 122 259 IPR005175 -
Mepo5g00427 320 MobiDBLite consensus disorder prediction 299 320 - -
Mepo5g00427 320 MobiDBLite consensus disorder prediction 30 79 - -
Mepo5g00427 320 CDD DUF296 126 193 IPR005175 -
Mepo5g00427 320 MobiDBLite consensus disorder prediction 251 320 - -
Mepo5g00427 320 FunFam AT-hook motif nuclear-localized protein 125 252 - -
Mepo5g00427 320 Gene3D - 125 259 - -
Mepo5g00427 320 SUPERFAMILY AF0104/ALDC/Ptd012-like 122 250 - -
Mepo5g00427 320 MobiDBLite consensus disorder prediction 22 116 - -
Mepo5g00427 320 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 314 IPR014476 GO:0003680
Mepo5g00427 320 MobiDBLite consensus disorder prediction 269 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00427 Mepo-Chr5 3761777 3763033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00427 1 320 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 56.034 7.54e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00427 - - tpra:123911246 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00427 5 3761777 3763033 Mepo5g00427 5 3761777 3763033 ECH