Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00410 ATGGCACCATATGCACACTTGGCAATTTACAAAGTTTGCGGTGTCTTTGGTTGTGCTGAAAGTGTCATATTAGCTGGAATGGATGTTGCAGTTGATGATGGTGTTGATGTTCTTTCTCTCTCCCTTGGACAACCCTCTACTTCTTTCTTTGAAAGTGGAATTGCACTTGGAGCATTTATTGCAATTCAAAAGGGAATTTTTGTTAGTTGTTCAGTTGGAAATTCAGGTCCTTTTCATGGTACATTGGCTAATGAAGCACCATGGATTTTAACTGCTGGTGCTAGCACAATTGATAGAAAAATAGAGGCAGTAGCTAAGCTTGGGGATGGGACGGAATATCTTGGAGAATCAGTTTTCCAACCAAAAAACTTTGCATCAACATTATTGCCAGTTGTATATGCAGGTGCAATTAACACAAGTGATGATTTCATTGCCTTTTGTAATCCTTTTGCCATAGAGAATGTTGATGTCAAGGGAAAGGTAGTTGTGTGTGAGCAAGGTGGATCGGTTGAAAGAGTAGCCAAAGGTCAAGCAGTTAAAGATGCTGGTGGTGCTGCTATGATACTTTTGAACGGTGAAGATGAAGCTTTCAATCCAATTGCTGATGTTCATGTTCTATCTGCTGTGCATGTAAGTTACTCTGCTGGTTTAACCATCAAAGATTATATAAACTCAACTTCAACGCCAATGGCTACAATTTTATTCAAAGGAACTGTTATTGGAAATCCACTTTCCCCTCAAGTTGCTTCATTTTCATCGAGAGGTCCAAGCAAAACAAGCCCTGGAATTCTTAAACTAGACATAATTGGACATGGATTGAACATTCTAGCAGGATGGCCTATATCACTAGACAATAGTACATCGTCATTTAACATAATTGCAGGTACCTCAATGTCTTGTCCTCATCTTAGTGGCATTGCTGCTTTGTTGAAAAACTCGCATCCAGATTGGTCACCAGCAGCTATAAAATCAGCAATCATGACAACTGCTACTCAGGTTAATCTCCATGGTAAGCCTATTTTGGACCAAAGGCTGCTGGTAGCTAATGTATTTGCCACTAGTGCTGGACATGTTAACCCTTCAAAAGCAAACGATCCAAGACTTGTTTATGACATTGAACCAAATGATTATGTTCCTTATTTGTGTGGTTTGAATTATACTGATATACAAGTTGGAATTATTTTGCAGCAGAAAGTGAAATGCTCTGATGTAAAGACCACACCACAAGCACAACTTAATTATCCATCGATTTCGATTTGGTTGGGAAATACTTCACAGTTTTATAGTAGAACCTTAACAAATGTTGGACCTGTAAACACAACTTACAATGTGGTAATTGATGTGCCTTTGGCAGTACGTATGAGTGTAAGGCCGTTTTCAAATGACATTCACTGA 1395 0.3892 MAPYAHLAIYKVCGVFGCAESVILAGMDVAVDDGVDVLSLSLGQPSTSFFESGIALGAFIAIQKGIFVSCSVGNSGPFHGTLANEAPWILTAGASTIDRKIEAVAKLGDGTEYLGESVFQPKNFASTLLPVVYAGAINTSDDFIAFCNPFAIENVDVKGKVVVCEQGGSVERVAKGQAVKDAGGAAMILLNGEDEAFNPIADVHVLSAVHVSYSAGLTIKDYINSTSTPMATILFKGTVIGNPLSPQVASFSSRGPSKTSPGILKLDIIGHGLNILAGWPISLDNSTSSFNIIAGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTATQVNLHGKPILDQRLLVANVFATSAGHVNPSKANDPRLVYDIEPNDYVPYLCGLNYTDIQVGIILQQKVKCSDVKTTPQAQLNYPSISIWLGNTSQFYSRTLTNVGPVNTTYNVVIDVPLAVRMSVRPFSNDIH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00410 464 Pfam PA domain 130 218 IPR003137 -
Mepo5g00410 464 Pfam Subtilase family 1 337 IPR000209 GO:0006508|GO:0008236
Mepo5g00410 464 SUPERFAMILY Subtilisin-like 1 367 IPR036852 GO:0004252|GO:0006508
Mepo5g00410 464 Pfam Fibronectin type-III domain 411 458 IPR041469 -
Mepo5g00410 464 Gene3D - 98 241 - -
Mepo5g00410 464 SUPERFAMILY PA domain 129 253 IPR046450 -
Mepo5g00410 464 Gene3D Peptidase S8/S53 domain 1 377 IPR036852 GO:0004252|GO:0006508
Mepo5g00410 464 Gene3D - 381 460 - -
Mepo5g00410 464 CDD PA_subtilisin_like 104 233 - -
Mepo5g00410 464 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 458 IPR045051 -
Mepo5g00410 464 ProSiteProfiles Serine proteases, subtilase domain profile. 1 364 - -
Mepo5g00410 464 FunFam subtilisin-like protease SBT1.5 98 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00410 Mepo-Chr5 3637221 3638615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00410 1 458 Subtilisin-like Serine Gene Family AT1G04110 44.468 1.48e-127 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00410 - - lja:Lj2g3v2002920.1 657.521