Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00400 ATGGCTCATTTGGTTTATGGTGAAACTCCATCTTTTGGAAACTCACACCATGGACAAGGTCAACAACTTGTTCCATTTCCAACCACTTCAAGTTCCTTAAGGATCTTACTCTTACATGGCAACCTGGAAATTTGCATCCAAGAGGCCAAAAACCTTCCTAACATGGACACTTTTCACAACAAAATGGGGGCAATGCTTTCAATCATACCTAAAAAGCTTGGTAACAAAATGAACCAAACCAGTGATCCATATGTCACAGTTTCTGTGGCTGGTGCTGTGATTGCAAGAACTTTTGTAATCAGAAACAATGAGAACCCTGTTTGGAATCAGCACTTCAATGTACCTGTTGCACATCTTGCATCAGAGATTCACTTTGTTGTAAAAGACAGTGATATTGTTGGTTCACAGCTTATTGGTGCAGTTGGAATTCCAGTTGAAAAATTATGTGATGGTGCAAAAGTTGAAGGCTTTTTCCCCATTCTTAATGCTAATGGAAAACCCTTCAAGACTGAAACCATTTTGAGTTTATCAATTCAGTATACTCCTATTCATAAGGTAGCCCTTTATAGCAATGGCGTTGGTGATGATTATCAAGGTGTTCCTGCTACATATTTTCCACTTAGAAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCCACAAGGTTGTCTTCCTAGTTTGAGGGTTGATGGTGGTGATCATGATGCGAGTTATGAGCATGGAAATTGTTGGTATGATATCTTTGATGCAATAAGTCAGGCGCGTCGATTGGTCTATATTGTTGGTTGGTCCGTGTACTACAATGTTAGTCTCATTAGGGATACTAGATATGGAAAAGATTGTACATTAGGTGAACTTCTCAAAGCCAAATCACAAGAAGGTGTGAGAGTGCTTCTACTTGTGTGGGATGATCCTACTTCTAAAAGCATGTTTGGATATAAAACAGTTGGACTTATGAACACTTACGACGAGGAAACTCGCAGTTTTTTCAAGCACTCTTCAGTTAGGGTGCTTCTTTGCCCAAGATCTGGAGGAAAAGGACATAGCTGGCTCAAACAGCAGGAAGCTGGAACAATCTATACTCATCACCAGAAGACAGTCATTGTGGATGCTGATGCTGGCCAGCATAAAAGAAAGATTGTAGCTTTCATCGGAGGCCTTGATTTATGTCTCGGAAGATATGATACTCCAGCACATTCTCTCTTTAGGACTTTGCAGACTACACACAAAGATGACTTTCATAATCCTAACTTTGAGGGTTCTGTTACTGGTTGTCCAAGACAACCATGGCATGACTTGCATTCCAAAGTTGATGGTCCTGCTGCCTATGACATCCTCACCAATTTTGAGGAGCGTTGGTTGATGGCATTAAAAATGACTACACTTCAAAAGATGAAAACTTCACATGATGATTCGTTACTGAAAATTGACAGAATCTCTGACATTATTGGCACTGATGAAGTACCTTGCGTTGATGAACATAACAAGGAGACTTGGCATGTTCAGAACTTGGTTTGTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTAAAAGCAATCAGAGCAGCACAGAAGTTCATTTATATTGAGAATCAATATTTTCTTGGCTCGTCATATAATTGGGATTCTTACAAAGACCTCGGTGCAAACAATTTAATTCCAATGGAAATTGCTCTAAAGATAGCAAACAAAATCAAACAGAAAGAGAGATTCTGTGTGTATATTGTGATTCCTATGTGGCCTGAAGGTGTACCCTCAAGTACAGCTACTCAGCGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGGAACAGTTTACAAGGCCTTAGAGGAAGCTGGACTTGAAAATGAGTATGAACCACAAGACTACTTGAATTTCTTTTGCCTAGGAAATCGCGAGCTCTCGGATAATGAAAATATTTCAAATGGTGTAAAATCTAATGGAAAAAACACTCCTCAGGCACTTGCTAAAAAGAACAGAAGATTCATGATATATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTAATGGGATCTGCCAACATAAACCAAAGATCCATGGAAGGCACTAGAGACACAGAAATTGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAACCAAGCAATCTAAACCTCATGGCCAGGCAAGATTTATAAACTTAAAAGTGCATGGTTATAGAATGTCATTATGGAGTGAACACATAGGAGGTGTGGAAGAATGTTTCAAGCAACCAGAGAGCATTGAATGTGTGAGAAGAATAAGGTCATTGAGTGAATATAACTGGAGACAATATAAAGTGGGGGAAATGTTTTCAGTCTTACCTAAAAAACTTGGTGGCAAAATTCAAGGCAAAATGTCTCGTAATATGACTAGTGATCCATATGTAACTGTTTCTGTAGCTGGTGCTGTTATTGCAAGAACCTTTGTAATTAGAAACAATGAGAACCCTGTTTGGAATCAGCACTTCAATGTACCTGTTGCACATCTTGCATCAGATATTCACTTTGTTGTAAAAGACAGTGATATTGTTGGTTCAGAGATTATTGGTGCAGTTGGAATTCCAGTTGAAAAGTTATGTGATGGTGCAAAAGTTGAAGGCATTTTTCCCATTCTCAATGCTAATGGAAAACCCTTTAACACAGAAACAATTTTGAGCTTGTCAATTCAGTATACACCTGTTGATAAGGGTTCTGTTACTGGTTGTCCAAGACAACCATGGCATGACTTGCATTCCAAAGTTGATGGTCCTGCTGCCTATGACATCCTCACCAATTTTGAGGAGCGTGCAAACAACTTAATTCCGATGGAAATTGCGCTAAAAATAGCCAACAAAATCAAACAGAAAGAAAGATTCTCTGTGTATATTGTGATTCCTATGTGGCCTGAAGGTGTACCCTCAAGTACAGCTACTCAAAGGATTCTCCTTTGGCAGTTCAAAACAATGCAAATGATGTATGGAACAATTTACAAGGCATTAGAGGAGGCTGGACTTGAAAATGAGTATGAACCACAGGACTACTTGAATTTCTTTTGCCTTGGCAATCGCGAGCTCGCCGATAATGAAAACATTTCAAATGTTGTAAAACCTACAGGACAAAACAATCCTCAGGTACTCACTCAAAAGAACAGAAGATTCATGATATATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTAATGGGATCTGCCAACATAAATCAAAGATCAATGGAAGGCACTAGAGACACAGAAATTGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAACCAAGCATTCTAAACCTCATGGCCAGGTGCATGGTTATAGAATGTCACTATGGAGTGAGCACATAGGAGGTGTGGAAGAATGTTTCAAGCAACCAGAGAGCATTGAATGTGTGAGAAGAATAAGGTCATTGAGTGAGTATAACTGGAGACAATATGTGGCTGATGAAGTAACTGAAATGAATGGTCATTTACTAAAATACCCACTTGAGGTTGATTCAAAGGGCATTGTGAAACCTCTTGTTGGCTGTGAAACATTCCCTGATGTTGGTGGGAACATAAAGGGCACCTTTACTGTACTTCAAGAAAATCTCACAATTTGA 3642 0.3896 MAHLVYGETPSFGNSHHGQGQQLVPFPTTSSSLRILLLHGNLEICIQEAKNLPNMDTFHNKMGAMLSIIPKKLGNKMNQTSDPYVTVSVAGAVIARTFVIRNNENPVWNQHFNVPVAHLASEIHFVVKDSDIVGSQLIGAVGIPVEKLCDGAKVEGFFPILNANGKPFKTETILSLSIQYTPIHKVALYSNGVGDDYQGVPATYFPLRKGGKVTLYQDAHVPQGCLPSLRVDGGDHDASYEHGNCWYDIFDAISQARRLVYIVGWSVYYNVSLIRDTRYGKDCTLGELLKAKSQEGVRVLLLVWDDPTSKSMFGYKTVGLMNTYDEETRSFFKHSSVRVLLCPRSGGKGHSWLKQQEAGTIYTHHQKTVIVDADAGQHKRKIVAFIGGLDLCLGRYDTPAHSLFRTLQTTHKDDFHNPNFEGSVTGCPRQPWHDLHSKVDGPAAYDILTNFEERWLMALKMTTLQKMKTSHDDSLLKIDRISDIIGTDEVPCVDEHNKETWHVQNLVCGKNVMIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYKDLGANNLIPMEIALKIANKIKQKERFCVYIVIPMWPEGVPSSTATQRILFWQFKTMQMMYGTVYKALEEAGLENEYEPQDYLNFFCLGNRELSDNENISNGVKSNGKNTPQALAKKNRRFMIYVHSKGMIVDDEYVLMGSANINQRSMEGTRDTEIAMGAYQPNHTWATKQSKPHGQARFINLKVHGYRMSLWSEHIGGVEECFKQPESIECVRRIRSLSEYNWRQYKVGEMFSVLPKKLGGKIQGKMSRNMTSDPYVTVSVAGAVIARTFVIRNNENPVWNQHFNVPVAHLASDIHFVVKDSDIVGSEIIGAVGIPVEKLCDGAKVEGIFPILNANGKPFNTETILSLSIQYTPVDKGSVTGCPRQPWHDLHSKVDGPAAYDILTNFEERANNLIPMEIALKIANKIKQKERFSVYIVIPMWPEGVPSSTATQRILLWQFKTMQMMYGTIYKALEEAGLENEYEPQDYLNFFCLGNRELADNENISNVVKPTGQNNPQVLTQKNRRFMIYVHSKGMIVDDEYVLMGSANINQRSMEGTRDTEIAMGAYQPNHTWATKHSKPHGQVHGYRMSLWSEHIGGVEECFKQPESIECVRRIRSLSEYNWRQYVADEVTEMNGHLLKYPLEVDSKGIVKPLVGCETFPDVGGNIKGTFTVLQENLTI 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00400 1213 Pfam C2 domain 40 160 IPR000008 -
Mepo5g00400 1213 Pfam C2 domain 799 884 IPR000008 -
Mepo5g00400 1213 SUPERFAMILY Phospholipase D/nuclease 503 713 - -
Mepo5g00400 1213 SMART C2_3c 41 157 IPR000008 -
Mepo5g00400 1213 SMART C2_3c 764 881 IPR000008 -
Mepo5g00400 1213 FunFam Phospholipase D delta 236 474 - -
Mepo5g00400 1213 Pfam Phospholipase D Active site motif 361 395 IPR001736 GO:0003824
Mepo5g00400 1213 Pfam Phospholipase D Active site motif 1060 1086 IPR001736 GO:0003824
Mepo5g00400 1213 Pfam Phospholipase D Active site motif 672 698 IPR001736 GO:0003824
Mepo5g00400 1213 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 800 907 IPR035892 -
Mepo5g00400 1213 SUPERFAMILY Phospholipase D/nuclease 197 461 - -
Mepo5g00400 1213 Pfam Phospholipase D C terminal 752 783 IPR024632 -
Mepo5g00400 1213 Pfam Phospholipase D C terminal 1133 1203 IPR024632 -
Mepo5g00400 1213 Gene3D Endonuclease Chain A 233 479 - -
Mepo5g00400 1213 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 671 698 IPR001736 GO:0003824
Mepo5g00400 1213 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 182 IPR035892 -
Mepo5g00400 1213 Gene3D Endonuclease Chain A 480 724 - -
Mepo5g00400 1213 PANTHER PHOSPHOLIPASE D 32 779 IPR015679 -
Mepo5g00400 1213 SUPERFAMILY Phospholipase D/nuclease 950 1144 - -
Mepo5g00400 1213 Gene3D Endonuclease Chain A 930 1113 - -
Mepo5g00400 1213 SMART pld_4 671 698 IPR001736 GO:0003824
Mepo5g00400 1213 SMART pld_4 1059 1086 IPR001736 GO:0003824
Mepo5g00400 1213 SMART pld_4 360 395 IPR001736 GO:0003824
Mepo5g00400 1213 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1059 1086 IPR001736 GO:0003824
Mepo5g00400 1213 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 360 395 IPR001736 GO:0003824
Mepo5g00400 1213 ProSiteProfiles C2 domain profile. 763 882 IPR000008 -
Mepo5g00400 1213 CDD C2_plant_PLD 36 181 - -
Mepo5g00400 1213 Gene3D C2 domain 35 175 IPR035892 -
Mepo5g00400 1213 Gene3D C2 domain 780 899 IPR035892 -
Mepo5g00400 1213 ProSiteProfiles C2 domain profile. 23 158 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00400 Mepo-Chr5 3548975 3560229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00400 850 942 Phospholipase D Gene Family (Wang group) AT2G42010 45.263 1.43e-14 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00400 K01115 - gmx:100786241 1342.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00400 5 3548975 3560229 Mepo5g00400 5 3548975 3560229 ECH