Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00376 ATGGGCGGCGAGGTGAGAGAAAATAGTGCGTATGAAACTCTGGAAGATCGGTGTCGGAGGTTGGAAGAGCAACAAACCAAGCTGAGGGAGGAGTTCAATGAGGTGTTGCAAGAGAAGAAGAAGAAGAAACTCAAGGTCAAAGACAATGAAAATGAAGATTCAACCGCGGGTTATCTTTCTGGTTTCTTCTTCTCTCTAAGTCCTTATGCTAACGTTTTGAAATGCATGGGACATGCTGTTTATGTCCACGACGTGACCACCGGCCAGATCATATATTGGAATAATTCAGCAGAAACTCTGTATGGATGGAAGGCAAATGAGATAATTGGACAAAGATTAGCTGATTACCTAGTTGCTGAAGAATATTATGGATCTCTACGAAGAATTCTACATCAGTTGATCACAGGAGTGCCATGGTCTGGACAGTTTCCTTTGAAGAAGAGGTCTGGTGAAATATTTATGGCAATGGTAACAAAAACTCCTCTCTATGAGGATGGTAAGCTTGTTGGTGTTATCTCTATTTCCAGTGATGCGGTTTTAGTTAACTCTAAGGATTTCGACAAGCAAAGAACTTGCCAATCTCGTACGAATGACCAACCTGGAATTCAAAGGTCAAAAAGGATTCATTGGCCTCCACGCCCGCAAATCGCTTCATCAGTTTCCAATCTGGCATCAAAGTTTCTTCCACTCCGGCAGACAGATGACACAATTTCCAAGAACACTTCAACAGACGCAGATGATCAAACACCAGGGAAACATAGCATTTATGAAACTGAATCTCGTTCCAGAAGTTACCAAAAAGAAAACACAACTGTCCGGGAAGCCAGCAAGAAGGATGAGTCGTCAACTGAATTTAGCCAGCCTTCTAATATTGCAGCTAGAGTCTTTGCTAAGCTTCGAGGGGAAAGTGGAAAATATAGGGATACTAGAAGTTTTAAAGACAGTTTTGCAACTGATGATAGTTCAGGAAGTAACAGAGTGAATAATGAAATTGATTTATCTGGAAGTTCAGTTGCATTAACGTCGCACCAGGATATTTCAAATGGAGAAGATAAAGAAGAAAAGCTCCAAAAACATCCAAAGAAATTGGAGCCAAAAGCTACGAATATGGTGATAGAAGATGAAATTGAAGTGCAAAAGCAGCAAGAAGGGTTGCCGTTGGCGAGCTCGAAGGAGAGTATAAATGGCTGCACGAGTTCATCAAGCAAAGGGAAAAGTGAATCAAACTCTGTTGTAGAGCGTGAAATCCATTGGGAAGACCTTCAATTAAGAAGGGAGATTGGGCAAGGTTCTTATGCTGTTGTTTATCATGGAATTTGGAATGCATCGGATGTTGCTGTCAAGGTTTACTTTGGGAATGGATACGCAGAGGAGACTTTACAAAACCACAAAAAAGAGGTTGATATAATGAAAAGATTGAGACACCCAAATGTATTGCTTTTCATGGGAGCCATATATTCTCAGGAAAGGCATGCCATAGTGACAGAGTTATTACCTAGGGGAAGCCTTTTCAGAACACTTCACAAGAACAATCAAACATTAGACATCAAAAGGCATCTTAGAATGGCTCTTGATGTTGCTAGAGGAATGAATTATCTTCACCACAGAAATCCACCAATCGTGCATAGAGACCTAAAGTCTTCTAACCTGCTTGTTGATAAAAACTGGAATGTCAAGGTTGGAGACTTTGGCCTGTCCAAATTGAAGGATGCAACTTTACTGACTACCAAATCTGGGAGAGGCACTCCTCAGTGGATGGCCCCTGAAGTCCTCCGCAGTGAACCTTCAAATGAAAAGTCTGATGTCTTCAGCTATGGAGTCGTTCTTTGGGAAATAATGACTCAATCTATTCCATGGAAAGATTTGAATTCCTTACAGGTTGTTGGAATAGTAGGCTTTATGGATAGAAGACTGGACCTGCCGGAGGGGCTTGACCCTCATGTAGCGTCAATCATAAATGACTGCTGGCAAAGTGATCCGAAACAACGGCCATCATTTGAAGAGCTAGTACAGAGAATGATGTTGATTGTCAGCAGAGTAACAGCTTTGTCATTAAACAGCATTGCAGAATCCTGA 2076 0.4152 MGGEVRENSAYETLEDRCRRLEEQQTKLREEFNEVLQEKKKKKLKVKDNENEDSTAGYLSGFFFSLSPYANVLKCMGHAVYVHDVTTGQIIYWNNSAETLYGWKANEIIGQRLADYLVAEEYYGSLRRILHQLITGVPWSGQFPLKKRSGEIFMAMVTKTPLYEDGKLVGVISISSDAVLVNSKDFDKQRTCQSRTNDQPGIQRSKRIHWPPRPQIASSVSNLASKFLPLRQTDDTISKNTSTDADDQTPGKHSIYETESRSRSYQKENTTVREASKKDESSTEFSQPSNIAARVFAKLRGESGKYRDTRSFKDSFATDDSSGSNRVNNEIDLSGSSVALTSHQDISNGEDKEEKLQKHPKKLEPKATNMVIEDEIEVQKQQEGLPLASSKESINGCTSSSSKGKSESNSVVEREIHWEDLQLRREIGQGSYAVVYHGIWNASDVAVKVYFGNGYAEETLQNHKKEVDIMKRLRHPNVLLFMGAIYSQERHAIVTELLPRGSLFRTLHKNNQTLDIKRHLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWNVKVGDFGLSKLKDATLLTTKSGRGTPQWMAPEVLRSEPSNEKSDVFSYGVVLWEIMTQSIPWKDLNSLQVVGIVGFMDRRLDLPEGLDPHVASIINDCWQSDPKQRPSFEELVQRMMLIVSRVTALSLNSIAES 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00376 691 Gene3D Phosphorylase Kinase; domain 1 414 498 - -
Mepo5g00376 691 MobiDBLite consensus disorder prediction 187 214 - -
Mepo5g00376 691 MobiDBLite consensus disorder prediction 316 345 - -
Mepo5g00376 691 Pfam PAS domain 82 177 IPR000014 -
Mepo5g00376 691 CDD PAS 79 177 IPR000014 -
Mepo5g00376 691 MobiDBLite consensus disorder prediction 231 249 - -
Mepo5g00376 691 ProSitePatterns Protein kinases ATP-binding region signature. 427 448 IPR017441 GO:0005524
Mepo5g00376 691 MobiDBLite consensus disorder prediction 383 407 - -
Mepo5g00376 691 Gene3D PAS domain 77 180 - -
Mepo5g00376 691 MobiDBLite consensus disorder prediction 250 281 - -
Mepo5g00376 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Mepo5g00376 691 MobiDBLite consensus disorder prediction 231 287 - -
Mepo5g00376 691 MobiDBLite consensus disorder prediction 313 365 - -
Mepo5g00376 691 CDD STKc_MAP3K-like 427 673 - -
Mepo5g00376 691 SMART serkin_6 421 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00376 691 ProSiteProfiles PAS repeat profile. 65 137 IPR000014 -
Mepo5g00376 691 NCBIfam PAS domain S-box protein 79 177 IPR000014 -
Mepo5g00376 691 SUPERFAMILY PYP-like sensor domain (PAS domain) 69 177 IPR035965 -
Mepo5g00376 691 PRINTS Tyrosine kinase catalytic domain signature 644 666 IPR001245 GO:0004672|GO:0006468
Mepo5g00376 691 PRINTS Tyrosine kinase catalytic domain signature 581 591 IPR001245 GO:0004672|GO:0006468
Mepo5g00376 691 PRINTS Tyrosine kinase catalytic domain signature 534 552 IPR001245 GO:0004672|GO:0006468
Mepo5g00376 691 PRINTS Tyrosine kinase catalytic domain signature 600 622 IPR001245 GO:0004672|GO:0006468
Mepo5g00376 691 PRINTS Tyrosine kinase catalytic domain signature 495 508 IPR001245 GO:0004672|GO:0006468
Mepo5g00376 691 SMART pas_2 67 135 IPR000014 -
Mepo5g00376 691 Gene3D Transferase(Phosphotransferase) domain 1 500 683 - -
Mepo5g00376 691 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 263 675 - -
Mepo5g00376 691 Pfam Protein tyrosine and serine/threonine kinase 421 672 IPR001245 GO:0004672|GO:0006468
Mepo5g00376 691 SUPERFAMILY Protein kinase-like (PK-like) 410 679 IPR011009 -
Mepo5g00376 691 Coils Coil 4 52 - -
Mepo5g00376 691 FunFam PAS domain-containing protein tyrosine kinase family protein 499 689 - -
Mepo5g00376 691 FunFam Serine/threonine-protein kinase isoform 1 412 499 - -
Mepo5g00376 691 ProSiteProfiles Protein kinase domain profile. 421 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00376 691 MobiDBLite consensus disorder prediction 380 410 - -
Mepo5g00376 691 MobiDBLite consensus disorder prediction 346 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00376 Mepo-Chr5 3304896 3311713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00376 1 674 MAP Kinase Kinase Kinase AT4G23050 44.415 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mepo5g00376 PK_Tyr_Ser-Thr 2.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00376 - - vra:106777922 875.544