Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00374 ATGGCGACATTACCGGTGGAGCAAACAGGTGAATCGGCGACGGCGGAGTCACAGAGATCGATTCCGACGCCGTTTCTGACGAAAACCTATCAACTCGTTGATGATTCTTCCGTTGATGATTTGGTTTCATGGAATGAAGATGGAACAAGCTTCATAGTTTGGAAACCTGCTGAATTTGCTAGAGATTTGCTTCCAAAGTATTTCAAACACAATAATTTCTCCAGTTTCGTTCGTCAACTCAATACCTATGGTTTTCGGAAGGTTATACCGGACCGGTGGGAATTTGCTAACGATGGATTCCGGCGAGGCGAGAAAAATCTGCTTCGGGATATACAGCGGAGAAAAATATTGCCAGCGGCAGGAACAGCGATGGCGACAGCAGTAGCTGCGGCTAATACTGTAACGGTAGCTATGGCGGCACCGGTTAGAATGGTGTCTCCAGCAACTTCTGGTGATGAACAGGTGGTTTCGTCGAATTCATCTCCGATTGCGATGAACAATGGTGCTTCGGTGCAGCGTAGCACAAGTTGCACCACTGCCCCGGAGTTAGTTGAAGAGAATGAACGGCTGAAAAAAGAGAATATGCAACTGAGTAATGAGTTGAGTCAATTGAGAGGTCTTTGCAATAATATACTTGCTATGATGAGTAATTATGCTTCTGGTTTTAGTAGACAGTTAGAATCTTCTACAAGTGCTGCAACGGCACGAGGCGTGGTTGTAACTGAAGGGAAAATTTTGGATCTTTTGCCTATAAGGAATGTTTCATTAGCTGAGGAAAATGTGGTGGTTAATGTGGGTGGAGCTGCCGGTGGTGTGCCGTGTGAGACGATGAGTTTGATGTTACCTGAGGTTCAAGCACCTCAGGTTCCTAAGCTGTTTGGGGTTTCAATTGGGCTTAAACGATGTAGGGCCGAGAATGAGGTTGAACCGGAGAGAGAGGAACGGGAACAACATCAACAAATGCGAATGCAAGCGCAGATGCAGACACAATCCTCACAGGAGACTGATCAAGGATCAGATGTGAAATCTGAACCGCGTGATGGTGATGGTGACTCGGATGATCAAGAGCGTCGTTGGAAATTGATGAAATAG 1092 0.4615 MATLPVEQTGESATAESQRSIPTPFLTKTYQLVDDSSVDDLVSWNEDGTSFIVWKPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVIPDRWEFANDGFRRGEKNLLRDIQRRKILPAAGTAMATAVAAANTVTVAMAAPVRMVSPATSGDEQVVSSNSSPIAMNNGASVQRSTSCTTAPELVEENERLKKENMQLSNELSQLRGLCNNILAMMSNYASGFSRQLESSTSAATARGVVVTEGKILDLLPIRNVSLAEENVVVNVGGAAGGVPCETMSLMLPEVQAPQVPKLFGVSIGLKRCRAENEVEPEREEREQHQQMRMQAQMQTQSSQETDQGSDVKSEPRDGDGDSDDQERRWKLMK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00374 363 MobiDBLite consensus disorder prediction 304 363 - -
Mepo5g00374 363 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00374 363 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00374 363 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00374 363 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00374 363 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00374 363 MobiDBLite consensus disorder prediction 321 338 - -
Mepo5g00374 363 MobiDBLite consensus disorder prediction 304 320 - -
Mepo5g00374 363 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 338 IPR027725 -
Mepo5g00374 363 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g00374 363 Coils Coil 180 207 - -
Mepo5g00374 363 FunFam Heat stress transcription factor B-4 17 115 - -
Mepo5g00374 363 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Mepo5g00374 363 MobiDBLite consensus disorder prediction 339 363 - -
Mepo5g00374 363 Gene3D - 17 115 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00374 Mepo-Chr5 3285339 3287455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00374 16 345 HSF AT4G11660 50.733 2.13e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo5g00374 HSF_DNA-bind 2.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00374 K09419 - gmx:100791020 437.958