Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00356 ATGGCGAAACTATTATCCTTAGCTTGTTTTCGAAACGAAGGATGGCACAATCTTTCACCTCGATCTCACTACCCTTCAATGCCTTCTTACCCCAAAGACGAGGCGGGGACCAGCACCGGCCCCGCCTCGGTCATGGAGGCTTCGAAGGTCACCGGACTTTTCTCAGTCCATGGAATGACTTGCTCCGCTTGCGCCGGATCCGTTGAGAAATCCATTAAACGGCTACATGGAATTCATGAAGCTGTTGTTGATGTACTTAATAACCGTGCCCGCGTCATCTTTCACCCTTCTTTTGTTAACGAGGAGGCTATTTGTGAGGCTATTGAAGATGCTGGATTTGACGCGGCGTTACTAACAGATGTAACAAATGAGAACACTATTCAAGTTTGCCGTATACAAATAAAAGGAATGACATGCACGTCGTGTTCCACCGCCGTTGAATCAGCCCTAAAAGCCGTCTCTGGAGTTGTTGGAGCCCAAGTAGCTTTAGCAACAGAAGAAGCTCAAGTTCATTACAATCCAAATATCATTACTCATAGCCAAATCTTGGAAGCTGTAGATGAAGCTGGATTTGAAGCAACACTCATTAGTTCAAGTGAAGACTTAAGCAAAATTGATCTCCACGTGGAAGGCGATCTCACCAATAATGCCATGATCAAACTCGTTGAAGATTCTCTTCGATCACTCCCTGGAGTTTTAGAATTACACACCAATCTCGAAGTCAACAAAATTTCGCTTTCTTATAAATCAGACATAACAGGGCCAAGGGATTTCATTAATGTGATTGTAGAAACTAGTAATGGAAATTTGAAGGCGAAAATATTTCCCGGTGAAGGTGGAAGAAGAGATGCTCATAGAAAAAAGGAAATTAAAAGTTATTACAAATCTTTTTTATGGAGTTTGGTGTTTACTGTTCCAGTTTTTCTAACTTCCATGGTGTTTATGTATATACCTGGAATAAAAAATTTATTGGATTCGAAAATCGTGAAGATGCTTACTATTGGAGAGGTTATTCGTTGGGTGCTTGCAACACCAGTGCAGTTCATTTTTGGGTGGCGATTTTATATTGGTGCTTATAAATCATTGCGCCGTGGTTCTGCTAATATGGATGTGCTGATAGCACTGGGAACAAATGCAGCTTATTTCTATTCTGTTTATTCTGTTTTGAGAGCTGCTACTTCTAAGGTTTTTGAAGGTACTGATTTCTTTGAGACTAGTGCGATGCTTATTTCGTTTATTCTATTAGGAAAGTATCTTGAGGTTTTAGCTAAGGGGAAAACATCAAATGCAATTGCAAAGTTAATGAATTTGACACCTGATACTGCTATACTGTTGAGTTTGGATGGTGAAGGGAATGTTGTTGGGGAGGAAGAAATTGATAGTAGGTTGGTTCAGAAGAATGATGTGATTAAGATTATTCCGGGTGCAAAAGTTGCTTCTGATGGGTTTGTTGTTTGGGGACAGAGTCATGTGAATGAGAGCATGATAACAGGTGAGGCACGTCCCGTGTCTAAGAGGAAAGGTGATACTGTTATTGGTGGAACTTTGAATGAGAATGGTGTCTTGCATGTTAAGGCAACAAAGGTTGGATCAGAAAGTGCTCTTTCGCAGATTGTACGACTTGTTGAGTCTGCTCAGATGGCTAAAGCTCCTGTCCAGAAGTTTGCTGATCGCATTTCCAAATACTTTGTGCCTTTGGTGATCTTGATCTCACTTTCAACTTGGCTTGCCTGGTTCTTAGCTGGAAAATATCATGCTTACCCGAAATCCTGGATTCCGTCTTCCATGGACAGCTTTGAGCTTGCTCTACAGTTTGGAATATCTGTCATGGTTATTGCCTGCCCTTGCGCTTTGGGTTTAGCCACACCTACTGCTGTTATGGTTGGCACTGGAGTTGGTGCATCTCAGGGTGTATTGATCAAAGGGGGGCAAGCTTTGGAAAGTGCACATAAGGTAAACTGCATTGTTTTTGACAAGACCGGTACTCTTACTATTGGGAAGCCAGTGATAGTAAATACAAAACTATTGACAAAAATGGTACTCCGGGAATTCTATGAACTTGTTGCTGCAGCTGAGGTGAACAGTGAGCATCCACTAGCTAAGGCTGTTGTTGAGTATGCCAAAAAATTTAAAGATGAAGAGAACCCTTCTTGGCCAGAAGCACGAGATTTTGTTTCCATTACTGGACATGGAGTAAAGGCCACCGTTCGTAACAAGGAAATAATGGTCGGTAATAAGGGCTTGATGGTTGAACATAATATTGCAATTCCTGCTGTTGCTGAAGATCTACTTGCTGAAGCCGAAAACATGGCTCAAACAGGAATTTTAGTATCTATAAATAGGGAAGTAGCTGGGGTTTTAGCAATATCTGATCCACTGAAACCAGGTGCTCAAGAAGTGATTTCCATTCTCAAGTCTATGAAAATTAGGAGCATCATGGTGACTGGAGACAACTGGGGAACTGCTAATTCCATTGCTAGGGAAGTTGGAATTGAAGATGTTATTGCTGAAGCCAAACCGGATCAGAAAGCAGATAAAGTGAAAAACTTGCAGGCTTCTGGGTACACGGTGGCTATGGTAGGGGATGGTATCAATGATTCACCGGCACTAGTGGCAGCTGATGTTGGAATGGCAATAGGTGCTGGCACAGACATTGCTATTGAGGCAGCTGATATTGTACTAATGAAGAGCAACTTGGAGGATGTTATAACTGCCATTGATCTTTCAAGAAAAACATTTTCTCGTATACGCCTCAATTATGTTTGGGCTTTGGGTTATAATTTGCTTGGCATTCCAATAGCAGCTGGAGTTCTTTTCCCTTCTACAGGCTTTCGGCTGCCGCCTTGGATCGCTGGAGCTGCTATGGCTGCCTCTTCTGTCAGCGTTGTTTGCTGTTCTCTGTTGTTGAAATATTACAAGAGACCAAAGAAGCTGAACAGCCTTGACATAGGGGCCATATTGATCGAGACATCGAGTGATCCTTTGATCATACATGACGATTGA 3003 0.4216 MAKLLSLACFRNEGWHNLSPRSHYPSMPSYPKDEAGTSTGPASVMEASKVTGLFSVHGMTCSACAGSVEKSIKRLHGIHEAVVDVLNNRARVIFHPSFVNEEAICEAIEDAGFDAALLTDVTNENTIQVCRIQIKGMTCTSCSTAVESALKAVSGVVGAQVALATEEAQVHYNPNIITHSQILEAVDEAGFEATLISSSEDLSKIDLHVEGDLTNNAMIKLVEDSLRSLPGVLELHTNLEVNKISLSYKSDITGPRDFINVIVETSNGNLKAKIFPGEGGRRDAHRKKEIKSYYKSFLWSLVFTVPVFLTSMVFMYIPGIKNLLDSKIVKMLTIGEVIRWVLATPVQFIFGWRFYIGAYKSLRRGSANMDVLIALGTNAAYFYSVYSVLRAATSKVFEGTDFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLTPDTAILLSLDGEGNVVGEEEIDSRLVQKNDVIKIIPGAKVASDGFVVWGQSHVNESMITGEARPVSKRKGDTVIGGTLNENGVLHVKATKVGSESALSQIVRLVESAQMAKAPVQKFADRISKYFVPLVILISLSTWLAWFLAGKYHAYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVIVNTKLLTKMVLREFYELVAAAEVNSEHPLAKAVVEYAKKFKDEENPSWPEARDFVSITGHGVKATVRNKEIMVGNKGLMVEHNIAIPAVAEDLLAEAENMAQTGILVSINREVAGVLAISDPLKPGAQEVISILKSMKIRSIMVTGDNWGTANSIAREVGIEDVIAEAKPDQKADKVKNLQASGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLLGIPIAAGVLFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYKRPKKLNSLDIGAILIETSSDPLIIHDD 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00356 1000 SFLD C1.7: P-type atpase like 638 912 - -
Mepo5g00356 1000 ProSiteProfiles Heavy-metal-associated domain profile. 50 116 IPR006121 GO:0046872
Mepo5g00356 1000 Gene3D - 128 201 - -
Mepo5g00356 1000 PRINTS P-type cation-transporting ATPase superfamily signature 807 817 - -
Mepo5g00356 1000 PRINTS P-type cation-transporting ATPase superfamily signature 860 879 - -
Mepo5g00356 1000 PRINTS P-type cation-transporting ATPase superfamily signature 883 895 - -
Mepo5g00356 1000 PRINTS P-type cation-transporting ATPase superfamily signature 785 796 - -
Mepo5g00356 1000 PRINTS P-type cation-transporting ATPase superfamily signature 656 670 - -
Mepo5g00356 1000 PRINTS P-type cation-transporting ATPase superfamily signature 492 506 - -
Mepo5g00356 1000 SUPERFAMILY HAD-like 655 966 IPR036412 -
Mepo5g00356 1000 FunFam Copper-transporting ATPase HMA5 127 198 - -
Mepo5g00356 1000 FunFam Probable copper-transporting ATPase HMA5 762 917 - -
Mepo5g00356 1000 NCBIfam HAD-IC family P-type ATPase 409 944 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo5g00356 1000 Gene3D - 741 791 IPR023299 GO:0000166
Mepo5g00356 1000 Gene3D - 663 740 IPR023299 GO:0000166
Mepo5g00356 1000 Pfam haloacid dehalogenase-like hydrolase 652 874 - -
Mepo5g00356 1000 ProSitePatterns Heavy-metal-associated domain. 56 85 IPR017969 GO:0046872
Mepo5g00356 1000 PRINTS Copper-transporting ATPase 1 signature 106 126 - -
Mepo5g00356 1000 PRINTS Copper-transporting ATPase 1 signature 152 173 - -
Mepo5g00356 1000 PRINTS Copper-transporting ATPase 1 signature 51 76 - -
Mepo5g00356 1000 PRINTS Copper-transporting ATPase 1 signature 77 100 - -
Mepo5g00356 1000 ProSitePatterns Heavy-metal-associated domain. 134 163 IPR017969 GO:0046872
Mepo5g00356 1000 FunFam Copper-transporting ATPase 1, putative 424 546 - -
Mepo5g00356 1000 SUPERFAMILY HMA, heavy metal-associated domain 200 265 IPR036163 GO:0046872
Mepo5g00356 1000 NCBIfam heavy metal translocating P-type ATPase 369 969 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mepo5g00356 1000 NCBIfam copper ion binding protein 54 115 IPR006122 GO:0005507
Mepo5g00356 1000 NCBIfam copper ion binding protein 132 193 IPR006122 GO:0005507
Mepo5g00356 1000 ProSitePatterns E1-E2 ATPases phosphorylation site. 658 664 IPR018303 -
Mepo5g00356 1000 MobiDBLite consensus disorder prediction 21 41 - -
Mepo5g00356 1000 SUPERFAMILY HMA, heavy metal-associated domain 125 198 IPR036163 GO:0046872
Mepo5g00356 1000 ProSiteProfiles Heavy-metal-associated domain profile. 128 194 IPR006121 GO:0046872
Mepo5g00356 1000 SUPERFAMILY Calcium ATPase, transmembrane domain M 401 928 IPR023298 -
Mepo5g00356 1000 Pfam E1-E2 ATPase 455 634 - -
Mepo5g00356 1000 Gene3D - 623 917 IPR023214 -
Mepo5g00356 1000 FunFam Copper-transporting ATPase HMA5 49 120 - -
Mepo5g00356 1000 SFLD p-type atpase 638 912 IPR044492 -
Mepo5g00356 1000 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 3 982 - -
Mepo5g00356 1000 CDD HMA 132 194 IPR006121 GO:0046872
Mepo5g00356 1000 SUPERFAMILY Calcium ATPase, transduction domain A 456 542 IPR008250 -
Mepo5g00356 1000 CDD HMA 54 116 IPR006121 GO:0046872
Mepo5g00356 1000 CDD P-type_ATPase_Cu-like 295 970 - -
Mepo5g00356 1000 Gene3D - 48 118 - -
Mepo5g00356 1000 Gene3D - 424 546 - -
Mepo5g00356 1000 SUPERFAMILY HMA, heavy metal-associated domain 49 118 IPR036163 GO:0046872
Mepo5g00356 1000 Pfam Heavy-metal-associated domain 54 114 IPR006121 GO:0046872
Mepo5g00356 1000 Pfam Heavy-metal-associated domain 132 192 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00356 Mepo-Chr5 3098519 3103700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00356 3 989 Primary Pumps ATPases AT1G63440 74.320 0.0 1502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00356 K17686 - gmx:100816893 1573.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00356 5 3098519 3103700 Mepo5g00356 5 3098519 3103700 ECH