Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00346 ATGGGAAAAGGAAACCCTAGGTCTGTAGAAAAACGTGTATTAGGTCAAAATCCTCCAATTTCATCTTCAACTATACCTTCAGCACCTGTTTATTATCCAACCGAAGATGAATTCAAAGATCCTTTAGAATTTATTCACAAAATTAGACCCGAAGCTGAACCCTATGGAATTTGTAGAATTGTTCCACCGAATAATTGGAAACCTCCTTTTGCATTGGATCTAGATTCTTTCACTTTTCCGACGAAGACTCAGGCAATTCATAAGCTTCAGGTTCGTCCTGCTGCGTGTGACTCGAAGACGTTTGAGTTGGAGTATGGTAGGTTTTTGAGGGATTATTGTGGGAAGAAGGTTAAGAAGAGAGTTGTGTTTGAAGGGGAGGATTTGGATTTGTGTAAGGTGTTTAATGGTGTTAAGAGGTTTGGTGGTTATGATAAGGTTGTTGATGGGAAGAAATGGGGGGAGGTTGCAAGGGAGAGCTTTGGTTTTGTGCCGGGGAAGCAATATTCGTTGGAGACTTTTAGACGCATTGCGGATAGGTCGAGGAGGAGATGGTTTGGACAGGGACCTGTTTCAAGGGTGCAAATAGAGAAGAAATTCTGGGAGATTGTGGAGGGGTCGGTTGGTGAGGTTGAGGTTATGTATGGAAATGATTTGGATACATCTATCTATGGGAGTGGTTTTCCAAATGAAACCAATCAGAAACAGAAACAGAAACCACAATCTATTGATGATAAGTTATGGCAAGAATACTCAACTAACCCATGGAATCTGAATAATTTGCCCAAGTTAAAAGGCTCAATGCTTCGAGCTGTTCATCACAACATTACTGGTGTTATGGTACCCTGGCTGTATATTGGAATGCTATTCTCATCCTTCTGTTGGCATTTCGAGGATCACTGCTTTTATTCAATGAATTATCTACACTGGGGAGAGCCAAAATGCTGGTACAGTGTTCCTGGTAGTCAAGCCAGGGCATTTGAGAAGGTGATGAGAAGCAGCCTTCCAGACCTTTTCGATGCACAGCCTGATCTGCTTTTTCAGCTTGTTACTATGTTAAACCCATCTGTCTTGCAAGAAAATGGAGTCCCTGTCTACAGCACACTTCAGGAGCCTGGAAATTTTGTTATTACTTTCCCCAGAGCTTACCATGGTGGTTTCAATCTTGGCCTTAATTGTGCAGAGGCAGTCAATTTTGCTCCAGCTGACTGGCTACCACACGGTACATTTGGAGCTGATCTCTATAAGCGGTATCACAAAATAGCCGTCTTGTCTCACGAGGAGCTTCTTTGTGTAGTAGCCCAGTATGGTGATGTTGATAGCAGAGGGTCCTCTTATTTGAAATTGGAATTGCTGAAAATATCAGATAGAGAAAAATCTTGGAGGGAAAAACTTTGGAGAAGTGGTATCATTAAATCTTCTCGTTTAGCTCCTCGGAAATGTCCCCAATATGTAGGAACTGAAGATGATCCAGCATGCATTATTTGCCAGCAATATCTCTATCTCTCTGCAGTTGTATGCAGTTGCAGGCCATCATCTTTTGTGTGTCTGGAGCACTGGGAACACCTTTGTGAATGCAAAACTGCTAAACTTCGTCTTCTCTACCGTCATTCACTTGGTGAATTGTATGACTTGGCATTTTCTATTGACAAATATACTTCTGAAGAAAAAGCTGAGAGTAGAAATGTAAAAAGGCAGTCTTCATGTCTGAGTGCTTTGACAAAAAAGGTGAATGGTAGCTCCATTACTTTCACTCAACTTGCTACAGAATGGCTTCTGCAATCTAGTACTATTCTTCAAAATGTTTTTGTGACTGATGCATCTATTACTGCACTAAGGAAAGCTGAACAGTTTCTTTGGGCTGGTTCCGAGATGGATTCTGTTCGGGATATGGTAAAGAGTTTGACTGAAGCTCAGAAATGGGCAGAAGGGATAAAAAATTGTGTGACAAAAATTGAGTTGTGGTTGAGTCATCAGGACTCAAGTTTAAAGAAAGTTAATTTAGAATACGTTGAAGAGTTTCTGAGATTTAACCCTGTACCATGCAATGAGCCCCATTATCATAAACTGAAGGAATATGCAGAAGAAGCAAGATCGTTACTTCAGGAGATTGAGACTGCTTTGTCAATGTGCTCCAACATATCTGAGTTGGAACTTCTATACTCTAGAACTCGTGGCTTACCCATCTACGTGAAAGTGACTAAAAAATTAAAAGGGAAAATTTCATCAACCAAGAAATGGATGGATAGTGTCAGAAATTGCATCTCAGCTAAAGATCCTGCTGAATTAGATGTTGATGTTCTTTACAAGTTAAAATCAGTGATTGCAGATCTTCAAGTTCAACTCCCAGAGATAGATGCACTTCAGAATCTATTAAATCAGGCAGAATCTTGTAGTTCCCAATGTCGTTGTATGTTACAAGGTCCTATGAATCTCAAGAATGTTGGTTTGCTTCTTAAGGAATGGGACAGTTTTACAGTTGATGTACCAGAGTTGAGGCTACTAAGGAATTACCATTCAGATGCTGTGTCATGGGTTTCTCACTTCAATGATGTTTTAGGGAGAGTTCATAGACAGGAAGATCAGCAAAATTCAGTTGATGAATTGAAGAGCATTCTTGAAGAAGGTTTATCTTTGAAAATTCAAGTTGATGAGTTGCCTATAGTTGAGATTGAGCTGAAGAAGGCTAGTTGCCGACAGAAAGCTTTGAAGGCACATGATTCTAAGATGCCCCTCGAATCCATTCAGCAACTGCTAAAGGAGGCCGCCATGCTAGAAATTGAGGGAGAAAAACAATTCATCAGTTTATCTTGTGTGCTTCGTGTCGCCATGTGTTGGGAGGAAAGGGCCGGAGAGATTCTTTCAGTTGAGGCTTCTATTTCTGACTTTGAGGACATGATAAGAGCTTCAGAAAATATATTTGTTATTCTTGCTTCACTTGATGATGTTAACAAAGCGTTATCGGAAGCTAATTCCTGGTTAAGGAAATCAAAGCCATATTTAGCCTCTTCTAATTGTTTGTCAAACTCTGAGCGGAAAGTTGAGGACTTGCAGTTGTTGGTTTCTCAATCAAAGCATCTTAAAGTATCTTTGGAAGAAAGAAGGACACTTGAATTAGTTTTGAATGACTGCAAAAAATGGGAGTGTGAAGCACGTTCTCTACTTGATGATGGACGGTGCTTATTTGAATTGGATACCACTGTTCATGGGATAAGCAGTGGTTTATTGTTTAAAGTGGAAGATTTGATTGCAAGAATCCAGTCCGCCATAGCATCTGGTGTATCTCTTGGTTTTGACTTCAGTGACATTTCAAAACTTCAAGCATCTTATTCTACACTGGAGTGGTGCAAAAGAGCCCTATGTTTCTGCAATCATTCTCCTTGTTTAGAGGATGTTTTGGAAGTTGTGAAAGGCCTATCTCATTCCTCTGTTTCTGGTGCTCTATTGAAAGTACTGGTTGATGGGGTCGAATGGCTTAGGAGAGCGTTAGAGGGGATTTCTAGACCTTGCAATTCTAGAAGATGCAAACTGACAGATATTGAAGATATTCTTACTGATTATCAGGCTATTAAAATGACCTTTACGGAAGTAAATTGTCAACTTGAAGAAGCAATTGGAAAACATAGGCTGTGGCAAGAGCAAGTGCGACAATTTTTTAGCTTAAGCTCTAGGGAACGAACTTGGTCATCATTATTGCAGCTCAAGGAGCATGGAGATACCATTGCCTTTAGTTGCTCAGACCTTGAATTAATATTATCTGAAGTTGAAAAGGTGGAAAATTGGAAGAAAAGATGCATGGATAATATTGGAGCTTTATTCCAAAAAGAAAATTCGCTGCTTCATGCACTGCAGAAGATAAAACAGAATCTAGATAGATCACTATACATATATGGCAAGTTGCAAAATCAGAAGGAACCAAACCTGTGCAACTGCTGCTTTGTTGACTCTGAAGATCAGAAATTTCTTACTTGTTCTACTTGTATGGACTGCTATCACTTGCGGTGCATTGGACTAACATCAAAAGACGCTGGTCTCAGAAATTACAAGTGCTCTTACTGTGAAATTTTGAAGGGGAAATCCCAATATTCAAATGGAAGTTCCCTCCTGAGGTTTGAGAAGCATATTGAATTGAACATTCTTGTCAAACTTCTTTCTGATGCTGAACATTTCTGTCTCTGGATTGACGAAAAAGATCTTCTGAATCAACTTATTGAGAAGGCCTTTGCATGCAAATCTGGATTGAGAGAAATAGTGAACCTTTCTTCTGCTTATGTCAACGAAGATATTACCATCATCTCTGAAAAATTGACCATTGCTATAAAGGCTAGCAAAGTGGCTGGTGTCTATGATCAAGGTGATAAATGTGACCTTGAGCTGGCATTAGCAAAATACTTGTGGAAAATTCAAGTCGATATATTATTAAGTGGTGTACAAAAGCCCACTATTGAACAGATTCAGAAACATCTGAAAGAGGGAATGTCTATGGAAATATCACCCAAAGATCACTACATGCTGAAACTTACAAATATGAATTGCTTGGTCATGCACTGGGTAGAAATAGCCAAAAAGGCATCAAATGATTCAGGAGCACATAGCCTAGATAAAGTATATGAACTTTTAGCGGAAGGTGAAAACTTGCCTGTTGATGTAAATGAGGAACTCAGGATGTTAAGAGCTCGATGCATGCTTTACTGCATTTGTCGAACGCCCTTTGATCCCGGAAGGATGATTGCGTGTTATCAATGTAGTGAGTGGTATCACTTTGATTGTATGAAATTATCATGCACGCAAGATATGTACATTTGCCCTGCGTGTATCCCATGTACAACATTGCCTACTAACCATGACAGATTAACTAGTGGGAAACTTGAGGAGCCTAAAACCCCTTCTCCCAGGCATACAAACCCTAGAAAGAAACAGAAGAGGGATGTGCTGAGTCACACTTGCGTCATGTTTGCATCTAGGAATGAAGATGGTAGTAATTTTAGGTATCCAAATGGGATAGAATGTCTAAGGTGGAGAAATCGAAAGCCGTTTAGAAGAGCAACTAGGAAACGTGTTGAACTGCAAAGTCTTTCTCCATTTCTATATGCATAA 5094 0.3981 MGKGNPRSVEKRVLGQNPPISSSTIPSAPVYYPTEDEFKDPLEFIHKIRPEAEPYGICRIVPPNNWKPPFALDLDSFTFPTKTQAIHKLQVRPAACDSKTFELEYGRFLRDYCGKKVKKRVVFEGEDLDLCKVFNGVKRFGGYDKVVDGKKWGEVARESFGFVPGKQYSLETFRRIADRSRRRWFGQGPVSRVQIEKKFWEIVEGSVGEVEVMYGNDLDTSIYGSGFPNETNQKQKQKPQSIDDKLWQEYSTNPWNLNNLPKLKGSMLRAVHHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGSQARAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYSTLQEPGNFVITFPRAYHGGFNLGLNCAEAVNFAPADWLPHGTFGADLYKRYHKIAVLSHEELLCVVAQYGDVDSRGSSYLKLELLKISDREKSWREKLWRSGIIKSSRLAPRKCPQYVGTEDDPACIICQQYLYLSAVVCSCRPSSFVCLEHWEHLCECKTAKLRLLYRHSLGELYDLAFSIDKYTSEEKAESRNVKRQSSCLSALTKKVNGSSITFTQLATEWLLQSSTILQNVFVTDASITALRKAEQFLWAGSEMDSVRDMVKSLTEAQKWAEGIKNCVTKIELWLSHQDSSLKKVNLEYVEEFLRFNPVPCNEPHYHKLKEYAEEARSLLQEIETALSMCSNISELELLYSRTRGLPIYVKVTKKLKGKISSTKKWMDSVRNCISAKDPAELDVDVLYKLKSVIADLQVQLPEIDALQNLLNQAESCSSQCRCMLQGPMNLKNVGLLLKEWDSFTVDVPELRLLRNYHSDAVSWVSHFNDVLGRVHRQEDQQNSVDELKSILEEGLSLKIQVDELPIVEIELKKASCRQKALKAHDSKMPLESIQQLLKEAAMLEIEGEKQFISLSCVLRVAMCWEERAGEILSVEASISDFEDMIRASENIFVILASLDDVNKALSEANSWLRKSKPYLASSNCLSNSERKVEDLQLLVSQSKHLKVSLEERRTLELVLNDCKKWECEARSLLDDGRCLFELDTTVHGISSGLLFKVEDLIARIQSAIASGVSLGFDFSDISKLQASYSTLEWCKRALCFCNHSPCLEDVLEVVKGLSHSSVSGALLKVLVDGVEWLRRALEGISRPCNSRRCKLTDIEDILTDYQAIKMTFTEVNCQLEEAIGKHRLWQEQVRQFFSLSSRERTWSSLLQLKEHGDTIAFSCSDLELILSEVEKVENWKKRCMDNIGALFQKENSLLHALQKIKQNLDRSLYIYGKLQNQKEPNLCNCCFVDSEDQKFLTCSTCMDCYHLRCIGLTSKDAGLRNYKCSYCEILKGKSQYSNGSSLLRFEKHIELNILVKLLSDAEHFCLWIDEKDLLNQLIEKAFACKSGLREIVNLSSAYVNEDITIISEKLTIAIKASKVAGVYDQGDKCDLELALAKYLWKIQVDILLSGVQKPTIEQIQKHLKEGMSMEISPKDHYMLKLTNMNCLVMHWVEIAKKASNDSGAHSLDKVYELLAEGENLPVDVNEELRMLRARCMLYCICRTPFDPGRMIACYQCSEWYHFDCMKLSCTQDMYICPACIPCTTLPTNHDRLTSGKLEEPKTPSPRHTNPRKKQKRDVLSHTCVMFASRNEDGSNFRYPNGIECLRWRNRKPFRRATRKRVELQSLSPFLYA 1697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00346 1697 ProSiteProfiles JmjN domain profile. 28 69 IPR003349 -
Mepo5g00346 1697 FunFam Transcription factor jumonji (JmjC) domain-containing protein 15 118 - -
Mepo5g00346 1697 Pfam jmjN domain 29 62 IPR003349 -
Mepo5g00346 1697 CDD ARID 97 164 - -
Mepo5g00346 1697 ProSitePatterns Zinc finger PHD-type signature. 1564 1604 IPR019786 -
Mepo5g00346 1697 Pfam PLU-1-like protein 1008 1282 IPR013637 -
Mepo5g00346 1697 Pfam PLU-1-like protein 757 850 IPR013637 -
Mepo5g00346 1697 Pfam PLU-1-like protein 817 1047 IPR013637 -
Mepo5g00346 1697 SMART JmjN_1 27 68 IPR003349 -
Mepo5g00346 1697 MobiDBLite consensus disorder prediction 1618 1643 - -
Mepo5g00346 1697 SUPERFAMILY Clavaminate synthase-like 209 430 - -
Mepo5g00346 1697 SUPERFAMILY FYVE/PHD zinc finger 1550 1608 IPR011011 -
Mepo5g00346 1697 Gene3D Cupin 21 421 - -
Mepo5g00346 1697 PANTHER LYSINE-SPECIFIC DEMETHYLASE 23 915 - -
Mepo5g00346 1697 Pfam JmjC domain, hydroxylase 282 398 IPR003347 -
Mepo5g00346 1697 SMART bright_3 96 176 IPR001606 GO:0003677
Mepo5g00346 1697 SMART PHD_3 1307 1353 IPR001965 -
Mepo5g00346 1697 SMART PHD_3 1563 1605 IPR001965 -
Mepo5g00346 1697 Pfam C5HC2 zinc finger 492 543 IPR004198 -
Mepo5g00346 1697 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1549 1606 IPR013083 -
Mepo5g00346 1697 Coils Coil 686 709 - -
Mepo5g00346 1697 Pfam ARID/BRIGHT DNA binding domain 109 165 IPR001606 GO:0003677
Mepo5g00346 1697 CDD PHD_SF 1308 1352 - -
Mepo5g00346 1697 MobiDBLite consensus disorder prediction 1 26 - -
Mepo5g00346 1697 ProSiteProfiles JmjC domain profile. 249 415 IPR003347 -
Mepo5g00346 1697 SMART cupin_9 249 415 IPR003347 -
Mepo5g00346 1697 SUPERFAMILY ARID-like 78 158 IPR036431 GO:0003677
Mepo5g00346 1697 SUPERFAMILY FYVE/PHD zinc finger 1304 1354 IPR011011 -
Mepo5g00346 1697 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1296 1368 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00346 Mepo-Chr5 3024736 3048125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00346 25 557 JUMONJI Transcription Factor Family AT2G34880 37.943 8.72e-106 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mepo5g00346 PLU-1 2.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00346 K11446 - gmx:100789512 2500.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00346 5 3024736 3048125 Mepo5g00346 5 3024736 3048125 ECH