Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00337 ATGTCTTGTGATAGTGATATCTATAATATTGATATTTCTTTCCATACACATTCAAGCCCAGAAATAGTCTCTTATGATCCTTATTACACTTTCAATTATATTGAAACAGTTCAAGAGGATTTGAACAATTCTCTTGAGTCATTTTCCTCTTCCTTCTTTTCTTTTTCTTCTCCAACCAGTGAGCATGGAAATTTCTCTGCTTTGGATGGGTCTAGCTTGAAAACCAAGGAATGCCAAATGGGTGTAGATTACACTTACTATCAAAAGTTAATGCAGAGGAGCTACAGCTGTAACAATTTTCATAAGAAACCTGATTTTCCTTCTCAAGCTTATTACCATAACACACACATGGATTCCCCAATTTTTCAATGTCATGAATTGAGCTCCCCCGAAAATGGTTTCTTCACCGGACAAATAAGAAGGGCGTGCAGTGCAAGAGATTTGCAGAACATGGCAACACCAGGGTCTGAAACGGATGAAGTAAACTTCAAAGTAGGGCGTTACAGTTTGGAAGAACGAAAAGAAAAAATCTCTAGATATAGAGCCAAGAGAAGCCGGAGGAAGTTCAACAAGATTATTAAGTATGCATGCCGAAAGACACTAGCAGACAATCGAACACGCATACGTGGTAGATTCGCACGTAACGACAAAACCAACGAGATTCCAAAACCTGTGTGTTCAGAAACAGAACAATATCATGAAGACCAGTTCTGGGTTGATTTCATTGAAGGGTTAAATGACGAGCTCCTCTATTAA 756 0.3849 MSCDSDIYNIDISFHTHSSPEIVSYDPYYTFNYIETVQEDLNNSLESFSSSFFSFSSPTSEHGNFSALDGSSLKTKECQMGVDYTYYQKLMQRSYSCNNFHKKPDFPSQAYYHNTHMDSPIFQCHELSSPENGFFTGQIRRACSARDLQNMATPGSETDEVNFKVGRYSLEERKEKISRYRAKRSRRKFNKIIKYACRKTLADNRTRIRGRFARNDKTNEIPKPVCSETEQYHEDQFWVDFIEGLNDELLY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00337 251 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 79 223 IPR045281 GO:0009909
Mepo5g00337 251 Pfam CCT motif 173 215 IPR010402 GO:0005515
Mepo5g00337 251 ProSiteProfiles CCT domain profile. 173 215 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00337 Mepo-Chr5 2939420 2941099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00337 172 220 C2C2-CO-like Transcription Factor Family AT5G24930 55.102 1.99e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo5g00337 CCT 6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00337 - - cam:101493593 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00337 5 2939420 2941099 Mepo5g00337 5 2939420 2941099 ECH
Mepo5g00337 5 2939420 2941099 Mepo2g04652 2 54849548 54851375 PCT