Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00329 ATGATCATTACTGAGAAAAATCGTAGAGAGATCTGCAAATACCTCTTCCAAGAGGGTGTTTGCTATGCAAAGAAGGATTTCAATTTGGCTAAGCACCCAGAGATTGATGTACCAAATCTGCAAGTTATTAAGCTGATGCAGAGTTTCAAATCTAGGGAATATGTGAGGGAAACTTTTGCTTGGATGAACTATTACTGGTTCCTTACCAACGATGGAATTGAGTTTCTCAGGACTTATTTGAATCTTCCATCTGAGATTGTGCCTGCTACTTTGAAGAAGCAGGCTAAGCCAGCTGGAAGGCCCTTCGGTGGTCCTCCTGGTGATCGCCCTAGGGGCCCACCAAGATTTGATGGAGAAAGGAGATTTGGTGGTGACCGTGATGGATACCGTGGAGGCCCAAGAGGACCTGCTGGTGAATTTGGAGGAGACAAGGGTGGAGCTCCAGCTGACTACAGGCCTTCTTTTGGGGGCCCTGGTGGTAGACCTGGCTTCGGTCGTGGTTCTGGTGGCTTTGGAGCACCAACTAGTTCAAACGATGCTTAA 543 0.4751 MIITEKNRREICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00329 180 MobiDBLite consensus disorder prediction 112 128 - -
Mepo5g00329 180 FunFam 40S ribosomal protein S10 1 104 - -
Mepo5g00329 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 173 IPR037447 -
Mepo5g00329 180 MobiDBLite consensus disorder prediction 91 180 - -
Mepo5g00329 180 Gene3D - 1 104 IPR036388 -
Mepo5g00329 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00329 Mepo-Chr5 2897966 2900881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00329 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 80.000 3.17e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00329 K02947 - gmx:100500445 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00329 5 2897966 2900881 Mepo5g00329 5 2897966 2900881 ECH
Mepo5g00329 5 2897966 2900881 Mepo2g04662 2 54960639 54962849 PCT