Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00328 ATGGGTCACCATTCATGCTGCAATCAACAGAAGGTTAAGAGAGGCCTTTGGTCACCTGAAGAAGATGAGAAACTCATTAGATACATTACTACTCATGGTTATGGTTGCTGGAGTGAAGTTCCTGAGAAAGCTGGGCTTCAAAGGTGTGGTAAGAGTTGTAGGTTGAGATGGATAAATTATTTAAGGCCTGATATTAGAAGAGGAAGGTTTACACCTGAGGAGGAGAAGTTAATTATAAGCCTTCATGGGGTTGTTGGTAACAGATGGGCTCACATTGCAAGCCACTTGCCTGGTAGAACAGACAATGAAATAAAAAACTATTGGAATTCATGGATCAAAAAGAAAATTAGAAAATCTTCTTCTTCTGCTCCTAATTTATCAACACCAACTATGGATCATCATCATCCTCAGTTGATCAATTACAGTTCCAATCAACTAGATAATTACTTTACCAACCAAGAAAATGCAACAACAAAAGAAACATTATTTTCATCAACATGCCCTTTATTTATGTTTGACACAAGTTCACTCCATGAAACAACAGCAACAGACACCAATGTAATAAGACCAGAAGTACTATTCCATCATGATTCTGTGAGTTTAAGTTCTGACTCATGGAACTTGAATCACCATGATCATCATCAACATCATCAAGTTCAGACACTTCCTCCTCATCCAGCTGCAATAGCATTTACAACAATTCATGATACTAGTAATTATAATCTGCCACCATTGATAGAGAATAATGTGGAAAACAACATGGTGCAAATTGATCAAGTGCAATCTTGTAATATGGATGAGGAAGGAGGAGAGTTATTAACATTGGAGTCATTGCAAAGACAAGAAGAGTTGAATGAATGGGTGGAAACTCAACAACAGTGTCCTAGCTTTATTTTCAGCTGGGAGAGTGTTGAAGGACAAATTGGAGGTGAAGAACAAGTACTAGTACCAAACTCATCACATATGGGAACACCTAATTCACTTTCTCCTTTTCCTTCTTCACTATTATGA 1011 0.3739 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKSSSSAPNLSTPTMDHHHPQLINYSSNQLDNYFTNQENATTKETLFSSTCPLFMFDTSSLHETTATDTNVIRPEVLFHHDSVSLSSDSWNLNHHDHHQHHQVQTLPPHPAAIAFTTIHDTSNYNLPPLIENNVENNMVQIDQVQSCNMDEEGGELLTLESLQRQEELNEWVETQQQCPSFIFSWESVEGQIGGEEQVLVPNSSHMGTPNSLSPFPSSLL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00328 336 PANTHER MYB DOMAIN PROTEIN 55 1 275 - -
Mepo5g00328 336 FunFam MYB transcription factor 6 66 - -
Mepo5g00328 336 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mepo5g00328 336 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo5g00328 336 Gene3D - 6 66 - -
Mepo5g00328 336 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo5g00328 336 CDD SANT 17 61 IPR001005 -
Mepo5g00328 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo5g00328 336 SMART sant 66 114 IPR001005 -
Mepo5g00328 336 SMART sant 13 63 IPR001005 -
Mepo5g00328 336 FunFam Transcription factor MYB26 68 138 - -
Mepo5g00328 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo5g00328 336 CDD SANT 69 111 IPR001005 -
Mepo5g00328 336 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo5g00328 336 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo5g00328 336 MobiDBLite consensus disorder prediction 316 336 - -
Mepo5g00328 336 Gene3D - 68 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00328 Mepo-Chr5 2888845 2890858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00328 1 314 MYB Transcription Factor Family AT1G63910 50.700 4.77e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo5g00328 Myb_DNA-binding 5.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00328 K09422 K02947 gmx:100803556 407.527