Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo5g00323 | ATGGCTCAAGAACTCGAGAACAAAGCCAAAGAAGCTTTTTTCGACGACGATTTTTCACTCGCTGTTGATTTCTACTCTCAAGCAATCGAAATCGATCCAACCAACGCTAATCTCTTCGCCGATCGAGCACAATCGCATATCAAACTCAACGCTTTCACTGAAGCCGTTTCTGATGCTAATAAGGCTATTCAATTGAACCCTAATTTGTCTAAAGCTTATCTTCGCAAAGGGACTGCTTGTATTAATCTTGAAGAATATCATACTGCCAAGATTGCACTTGAAAAGGGGGCTTCTTTTGCACCTGATGATTCCAGATTCACTAATTTGATTCAACAATGTCAACGCTTTATTGCTGCTGAGGAATCAGAGAGTCTTACGAGCACCCTACCACCAAATGAACCCAAATCATCCGCTGCGTCTGTTGATGATACCCATTATTGTGATAAGAGTGATGAAACATCCAAAGAACCTCAAAGAGACAGTCCTGCATCCCAAACAAATGCAGTTGCACCAGTCAGACCAAAATACAGGCATGAATATTACCAGAAGCCAGAAGAAGTGGTTGTGACAATATTTGCAAAAGGGATACCAGCAGAAAATGTTGTTGTGGATTTTGGTGAACAAATTCTGAGTGTTACCATTGATGCCCCTGGCCAAGATGCCTACCATTACCGACCTCGATTGTTTGGAAAGATAATACCTGATAAGTGCAAAGTTGTGGTTTTGTCAACCAAAATTGAAATACGGCTGGCAAAAGCTGAGGCAATTCATTGGACATCTCTGGAATATAGCAAGGATGTGCTTCCCCAAAAGATAATTGTGCCTTCAGTTCAATCTGAAAGGCCTGCATATCCGTCATCGAAGTCAAGGACTAAGGATTGGGATAAGTTGGAAGCTGAAGTGAAAAAAGAGGAGAAAGAAGAAAAGCTTGATGGTGATGCGGCTTTGAATAAATTGTTCCGTGATATTTACCAAAATGCAGATGAGGACATGAGGAGAGCGATGAGCAAGTCTTTTCTGGAGTCAAATGGAACAGTGCTTTCAACTGATTGGAAAGAAGTGGGATCAAAGAAGGTGGAAGGAAGTCCCCCAGAAGGCATGGAGGTGAAGAAATGGGAGTATTGA | 1125 | 0.4187 | MAQELENKAKEAFFDDDFSLAVDFYSQAIEIDPTNANLFADRAQSHIKLNAFTEAVSDANKAIQLNPNLSKAYLRKGTACINLEEYHTAKIALEKGASFAPDDSRFTNLIQQCQRFIAAEESESLTSTLPPNEPKSSAASVDDTHYCDKSDETSKEPQRDSPASQTNAVAPVRPKYRHEYYQKPEEVVVTIFAKGIPAENVVVDFGEQILSVTIDAPGQDAYHYRPRLFGKIIPDKCKVVVLSTKIEIRLAKAEAIHWTSLEYSKDVLPQKIIVPSVQSERPAYPSSKSRTKDWDKLEAEVKKEEKEEKLDGDAALNKLFRDIYQNADEDMRRAMSKSFLESNGTVLSTDWKEVGSKKVEGSPPEGMEVKKWEY | 374 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo5g00323 | 374 | SUPERFAMILY | TPR-like | 2 | 114 | IPR011990 | GO:0005515 | |
Mepo5g00323 | 374 | CDD | p23_CS_SGT1_like | 179 | 262 | - | - | |
Mepo5g00323 | 374 | Pfam | CS domain | 177 | 252 | IPR007052 | - | |
Mepo5g00323 | 374 | MobiDBLite | consensus disorder prediction | 142 | 158 | - | - | |
Mepo5g00323 | 374 | SUPERFAMILY | HSP20-like chaperones | 170 | 268 | IPR008978 | - | |
Mepo5g00323 | 374 | MobiDBLite | consensus disorder prediction | 122 | 139 | - | - | |
Mepo5g00323 | 374 | PANTHER | PROTEIN SGT1 HOMOLOG | 1 | 372 | IPR044563 | GO:0051087 | |
Mepo5g00323 | 374 | Pfam | SGS domain | 292 | 372 | IPR007699 | - | |
Mepo5g00323 | 374 | FunFam | Protein SGT1 homolog | 1 | 128 | - | - | |
Mepo5g00323 | 374 | FunFam | Protein SGT1 homolog A | 171 | 274 | - | - | |
Mepo5g00323 | 374 | ProSiteProfiles | SGS domain profile. | 283 | 374 | IPR007699 | - | |
Mepo5g00323 | 374 | SMART | tpr_5 | 70 | 103 | IPR019734 | GO:0005515 | |
Mepo5g00323 | 374 | SMART | tpr_5 | 2 | 35 | IPR019734 | GO:0005515 | |
Mepo5g00323 | 374 | SMART | tpr_5 | 36 | 69 | IPR019734 | GO:0005515 | |
Mepo5g00323 | 374 | MobiDBLite | consensus disorder prediction | 122 | 169 | - | - | |
Mepo5g00323 | 374 | Gene3D | Tetratricopeptide repeat domain | 1 | 138 | IPR011990 | GO:0005515 | |
Mepo5g00323 | 374 | ProSiteProfiles | TPR repeat profile. | 36 | 69 | IPR019734 | GO:0005515 | |
Mepo5g00323 | 374 | Gene3D | - | 174 | 265 | IPR008978 | - | |
Mepo5g00323 | 374 | Pfam | Tetratricopeptide repeat | 71 | 103 | IPR019734 | GO:0005515 | |
Mepo5g00323 | 374 | Pfam | Tetratricopeptide repeat | 39 | 68 | IPR019734 | GO:0005515 | |
Mepo5g00323 | 374 | ProSiteProfiles | CS domain profile. | 173 | 262 | IPR007052 | - | |
Mepo5g00323 | 374 | ProSiteProfiles | TPR repeat profile. | 2 | 35 | IPR019734 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo5g00323 | Mepo-Chr5 | 2840198 | 2844408 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo5g00323 | 1 | 108 | U-box Gene Family | AT3G07370 | 30.556 | 3.35e-08 | 52.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo5g00323 | K12795 | - | gmx:100784022 | 558.14 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo5g00323 | 5 | 2840198 | 2844408 | Mepo5g00323 | 5 | 2840198 | 2844408 | ECH |