Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00319 ATGGTTGGGCTACCGTCTGCAGAGAACAGAGAAAATATATTGAGGACCCTTTTGGCTAAAGAGAAGGTGCACGGGGGACTTGATTTTAAGGAACTGGCAACTATGACTGAAGGATATAGTGGAAGTGATCTGAAGAACTTATGCACAACTGCTGCTTATAGGCCTGTTAGAGAGCTAATTCAGCAAGAGATACAAAAGGATTCGCAGAAAAAGAAGAAAGATGCCGAAGGACAAAATAACCAAGATGCTCAGGATGCGGAAGAGGAAGTTGAGCAGGAAAGAGTTATTGCCCTTAGGCCTTTGAATATGCAGGATTTCAAAGTGGCAAAGAGTCAGGTTGCCGCAAGCTTCGCAGCTGAGGGGGCTGGAATGAATGAGTTGAGGCAGTGGAATGACCTGTATGGAGAAGGTGGTTCAAGAAAGAAAGAGCAATTATCTTACTTCCTATGA 450 0.4422 MVGLPSAENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQEIQKDSQKKKKDAEGQNNQDAQDAEEEVEQERVIALRPLNMQDFKVAKSQVAASFAAEGAGMNELRQWNDLYGEGGSRKKEQLSYFL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00319 149 Coils Coil 73 93 - -
Mepo5g00319 149 MobiDBLite consensus disorder prediction 62 80 - -
Mepo5g00319 149 Gene3D - 5 114 - -
Mepo5g00319 149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 70 IPR027417 -
Mepo5g00319 149 Pfam AAA+ lid domain 27 67 IPR041569 -
Mepo5g00319 149 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 148 - -
Mepo5g00319 149 MobiDBLite consensus disorder prediction 62 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00319 Mepo-Chr5 2804647 2806436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00319 2 63 Calmodulin-binding Proteins AT3G56690 37.097 1.97e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00319 - - gmx:100783137 231.876